Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1

Hystrix brachyura bezoar is calcified undigested material found in the gastrointestinal tract known for various medicinal benefits including as an anticancer agent. However, the H. brachyura population has been declining due to its demand and is under Malaysian law protection. Therefore, present stu...

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Main Authors: Al’ aina Yuhainis Firus Khan, Qamar Uddin Ahmed, Alfi Khatib, Zalikha Ibrahim, Tanzina Sharmin Nipun, Hatim Abdullah Natto, Mohd Zuwairi Saiman, Zainul Amiruddin Zakaria, Ridhwan Abdul Wahab
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Language:English
English
Published: Blacpma 2024
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Online Access:https://eprints.ums.edu.my/id/eprint/38589/1/ABSTRACT.pdf
https://eprints.ums.edu.my/id/eprint/38589/2/FULL%20TEXT.pdf
https://eprints.ums.edu.my/id/eprint/38589/
https://doi.org/10.37360/blacpma.24.23.1.4
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spelling my.ums.eprints.385892024-04-29T02:50:46Z https://eprints.ums.edu.my/id/eprint/38589/ Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1 Al’ aina Yuhainis Firus Khan Qamar Uddin Ahmed Alfi Khatib Zalikha Ibrahim Tanzina Sharmin Nipun Hatim Abdullah Natto Mohd Zuwairi Saiman Zainul Amiruddin Zakaria Ridhwan Abdul Wahab QD1-999 Chemistry RS400-431 Pharmaceutical chemistry Hystrix brachyura bezoar is calcified undigested material found in the gastrointestinal tract known for various medicinal benefits including as an anticancer agent. However, the H. brachyura population has been declining due to its demand and is under Malaysian law protection. Therefore, present study aimed to identify bezoar anticancer active compounds through metabolomics and in-silico approaches. Five replicates of bezoar powder were subjected to extraction using different solvent ratios of methanol-water (100, 75, 50, 25, 0% v/v). Cytotoxicity and metabolite profiling using liquid chromatography-mass spectrometry were conducted. Putative compounds identified were subjected to insilico analysis with targeted anticancer proteins namely, Bcl-2, Cyclin B/CDK1 complex, VEGF and NM23-H1. The correlation of LC-MS and cytotoxicity profile pinpointed two compounds, mangiferin and propafenone. In-silico study showed both compounds exerted good binding scores to all proteins with hydrophobic interaction dominating the ligand-protein complex binding, suggesting the ligands act as hydrophobes in the interactions. Blacpma 2024 Article NonPeerReviewed text en https://eprints.ums.edu.my/id/eprint/38589/1/ABSTRACT.pdf text en https://eprints.ums.edu.my/id/eprint/38589/2/FULL%20TEXT.pdf Al’ aina Yuhainis Firus Khan and Qamar Uddin Ahmed and Alfi Khatib and Zalikha Ibrahim and Tanzina Sharmin Nipun and Hatim Abdullah Natto and Mohd Zuwairi Saiman and Zainul Amiruddin Zakaria and Ridhwan Abdul Wahab (2024) Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1. Latin American and Caribbean Bulletin of Medicinal and Aromatic Plants, 23 (1). pp. 41-60. ISSN 0717-7917 https://doi.org/10.37360/blacpma.24.23.1.4
institution Universiti Malaysia Sabah
building UMS Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Sabah
content_source UMS Institutional Repository
url_provider http://eprints.ums.edu.my/
language English
English
topic QD1-999 Chemistry
RS400-431 Pharmaceutical chemistry
spellingShingle QD1-999 Chemistry
RS400-431 Pharmaceutical chemistry
Al’ aina Yuhainis Firus Khan
Qamar Uddin Ahmed
Alfi Khatib
Zalikha Ibrahim
Tanzina Sharmin Nipun
Hatim Abdullah Natto
Mohd Zuwairi Saiman
Zainul Amiruddin Zakaria
Ridhwan Abdul Wahab
Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1
description Hystrix brachyura bezoar is calcified undigested material found in the gastrointestinal tract known for various medicinal benefits including as an anticancer agent. However, the H. brachyura population has been declining due to its demand and is under Malaysian law protection. Therefore, present study aimed to identify bezoar anticancer active compounds through metabolomics and in-silico approaches. Five replicates of bezoar powder were subjected to extraction using different solvent ratios of methanol-water (100, 75, 50, 25, 0% v/v). Cytotoxicity and metabolite profiling using liquid chromatography-mass spectrometry were conducted. Putative compounds identified were subjected to insilico analysis with targeted anticancer proteins namely, Bcl-2, Cyclin B/CDK1 complex, VEGF and NM23-H1. The correlation of LC-MS and cytotoxicity profile pinpointed two compounds, mangiferin and propafenone. In-silico study showed both compounds exerted good binding scores to all proteins with hydrophobic interaction dominating the ligand-protein complex binding, suggesting the ligands act as hydrophobes in the interactions.
format Article
author Al’ aina Yuhainis Firus Khan
Qamar Uddin Ahmed
Alfi Khatib
Zalikha Ibrahim
Tanzina Sharmin Nipun
Hatim Abdullah Natto
Mohd Zuwairi Saiman
Zainul Amiruddin Zakaria
Ridhwan Abdul Wahab
author_facet Al’ aina Yuhainis Firus Khan
Qamar Uddin Ahmed
Alfi Khatib
Zalikha Ibrahim
Tanzina Sharmin Nipun
Hatim Abdullah Natto
Mohd Zuwairi Saiman
Zainul Amiruddin Zakaria
Ridhwan Abdul Wahab
author_sort Al’ aina Yuhainis Firus Khan
title Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1
title_short Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1
title_full Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1
title_fullStr Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1
title_full_unstemmed Identification of cancer inhibitors from Hystrix brachyura bezoar extracts using LC-MS multivariate data analysis and in silico evaluation on Bcl-2, cyclin B/CDK1, VEGF and NM23-H1
title_sort identification of cancer inhibitors from hystrix brachyura bezoar extracts using lc-ms multivariate data analysis and in silico evaluation on bcl-2, cyclin b/cdk1, vegf and nm23-h1
publisher Blacpma
publishDate 2024
url https://eprints.ums.edu.my/id/eprint/38589/1/ABSTRACT.pdf
https://eprints.ums.edu.my/id/eprint/38589/2/FULL%20TEXT.pdf
https://eprints.ums.edu.my/id/eprint/38589/
https://doi.org/10.37360/blacpma.24.23.1.4
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