In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))

Protein Arginine Deiminase IV (PAD4) is a promising target for treating rheumatoid arthritis. Here, an in-silico screening was performed using PAD4 crystal structure against National Cancer Institute Diversity Set III compounds. Results obtained from the docking studies showed that the compounds hav...

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Main Authors: Ibrahim, Zalikha, Tejo, Bimo Ario, Mohammad Latif, Muhammad Alif, Karjiban, Roghayeh Abedi, Salleh, Abu Bakar, Abdul Rahman, Mohd Basyaruddin
Format: Article
Language:English
English
Published: Faculty of Science and Technology, Universiti Kebangsaan Malaysia 2016
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Online Access:http://irep.iium.edu.my/57350/1/Zalikha_20_6_5_SKAM2015.pdf
http://irep.iium.edu.my/57350/2/57350-In-Silico%20identification%20of%20potential%20protein_SCOPUS.pdf
http://irep.iium.edu.my/57350/
http://www.ukm.my/mjas/v20_n6/pdf/Zalikha_20_6_5.pdf
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spelling my.iium.irep.573502017-06-21T01:21:34Z http://irep.iium.edu.my/57350/ In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4)) Ibrahim, Zalikha Tejo, Bimo Ario Mohammad Latif, Muhammad Alif Karjiban, Roghayeh Abedi Salleh, Abu Bakar Abdul Rahman, Mohd Basyaruddin QD Chemistry Protein Arginine Deiminase IV (PAD4) is a promising target for treating rheumatoid arthritis. Here, an in-silico screening was performed using PAD4 crystal structure against National Cancer Institute Diversity Set III compounds. Results obtained from the docking studies showed that the compounds have high affinity towards the protein. Visual inspections of the top compounds indicated that they preferred to bind at the front door of the catalytic pocket instead of the back door. The current results from this screening could provide a basis for the development of new PAD4 inhibitors Protin arginina deiminase IV (PAD4) adalah sasaran yang berharapan untuk merawat artritis reumatoid. Di sini, satu saringan insilico telah dilakukan menggunakan struktur kristal PAD4 terhadap molekul dari Set Beraneka Institut Kanser Nasional III. Keputusan dari pengdokan molekular menunjukkan molekul-molekul tersebut mempunyai daya tarikan yang tinggi terhadap protin. Pemeriksaan secara visual ke atas molekul teratas menunjukkan mereka mempunyai kecenderungan untuk terikat di pintu hadapan poket katalisis daripada di pintu belakang. Keputusan daripada pencarian ini boleh menjadi asas kepada penemuan perencat PAD4 yang baru. Faculty of Science and Technology, Universiti Kebangsaan Malaysia 2016 Article REM application/pdf en http://irep.iium.edu.my/57350/1/Zalikha_20_6_5_SKAM2015.pdf application/pdf en http://irep.iium.edu.my/57350/2/57350-In-Silico%20identification%20of%20potential%20protein_SCOPUS.pdf Ibrahim, Zalikha and Tejo, Bimo Ario and Mohammad Latif, Muhammad Alif and Karjiban, Roghayeh Abedi and Salleh, Abu Bakar and Abdul Rahman, Mohd Basyaruddin (2016) In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4)). Malaysian Journal of Analytical Sciences, 20 (6). pp. 1269-1277. ISSN 1394-2506 http://www.ukm.my/mjas/v20_n6/pdf/Zalikha_20_6_5.pdf 10.17576/mjas-2016-2006-05
institution Universiti Islam Antarabangsa Malaysia
building IIUM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider International Islamic University Malaysia
content_source IIUM Repository (IREP)
url_provider http://irep.iium.edu.my/
language English
English
topic QD Chemistry
spellingShingle QD Chemistry
Ibrahim, Zalikha
Tejo, Bimo Ario
Mohammad Latif, Muhammad Alif
Karjiban, Roghayeh Abedi
Salleh, Abu Bakar
Abdul Rahman, Mohd Basyaruddin
In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))
description Protein Arginine Deiminase IV (PAD4) is a promising target for treating rheumatoid arthritis. Here, an in-silico screening was performed using PAD4 crystal structure against National Cancer Institute Diversity Set III compounds. Results obtained from the docking studies showed that the compounds have high affinity towards the protein. Visual inspections of the top compounds indicated that they preferred to bind at the front door of the catalytic pocket instead of the back door. The current results from this screening could provide a basis for the development of new PAD4 inhibitors Protin arginina deiminase IV (PAD4) adalah sasaran yang berharapan untuk merawat artritis reumatoid. Di sini, satu saringan insilico telah dilakukan menggunakan struktur kristal PAD4 terhadap molekul dari Set Beraneka Institut Kanser Nasional III. Keputusan dari pengdokan molekular menunjukkan molekul-molekul tersebut mempunyai daya tarikan yang tinggi terhadap protin. Pemeriksaan secara visual ke atas molekul teratas menunjukkan mereka mempunyai kecenderungan untuk terikat di pintu hadapan poket katalisis daripada di pintu belakang. Keputusan daripada pencarian ini boleh menjadi asas kepada penemuan perencat PAD4 yang baru.
format Article
author Ibrahim, Zalikha
Tejo, Bimo Ario
Mohammad Latif, Muhammad Alif
Karjiban, Roghayeh Abedi
Salleh, Abu Bakar
Abdul Rahman, Mohd Basyaruddin
author_facet Ibrahim, Zalikha
Tejo, Bimo Ario
Mohammad Latif, Muhammad Alif
Karjiban, Roghayeh Abedi
Salleh, Abu Bakar
Abdul Rahman, Mohd Basyaruddin
author_sort Ibrahim, Zalikha
title In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))
title_short In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))
title_full In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))
title_fullStr In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))
title_full_unstemmed In-silico identification of potential protein arginine deiminase IV (PAD4) inhibitors = Pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase IV (PAD4))
title_sort in-silico identification of potential protein arginine deiminase iv (pad4) inhibitors = pengenalpastian in-silico yang berpotensi sebagai perencat protin arginina deiminase iv (pad4))
publisher Faculty of Science and Technology, Universiti Kebangsaan Malaysia
publishDate 2016
url http://irep.iium.edu.my/57350/1/Zalikha_20_6_5_SKAM2015.pdf
http://irep.iium.edu.my/57350/2/57350-In-Silico%20identification%20of%20potential%20protein_SCOPUS.pdf
http://irep.iium.edu.my/57350/
http://www.ukm.my/mjas/v20_n6/pdf/Zalikha_20_6_5.pdf
_version_ 1643615124582301696
score 13.160551