Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors

Ionic liquids (ILs) are class of solvent whose properties can be modified and tuned to meet industrial requirements. However, a high number of potentially available cations and anions leads to an even increasing members of newly-synthesized ionic liquids, adding to the complexity of understanding on...

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Main Authors: Ghanem, O.B., Mutalib, M.I.A., Lévêque, J.-M., El-Harbawi, M.
Format: Article
Published: Elsevier Ltd 2017
Online Access:http://scholars.utp.edu.my/id/eprint/19760/
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006699372&doi=10.1016%2fj.chemosphere.2016.12.003&partnerID=40&md5=f32e8a98611fc97fd0476f9ea6b323d7
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spelling oai:scholars.utp.edu.my:197602023-01-04T02:12:52Z http://scholars.utp.edu.my/id/eprint/19760/ Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors Ghanem, O.B. Mutalib, M.I.A. Lévêque, J.-M. El-Harbawi, M. Ionic liquids (ILs) are class of solvent whose properties can be modified and tuned to meet industrial requirements. However, a high number of potentially available cations and anions leads to an even increasing members of newly-synthesized ionic liquids, adding to the complexity of understanding on their impact on aquatic organisms. Quantitative structure activity∖property relationship (QSAR∖QSPR) technique has been proven to be a useful method for toxicity prediction. In this work,σ-profile descriptors were used to build linear and non-linear QSAR models to predict the ecotoxicities of a wide variety of ILs towards bioluminescent bacterium Vibrio fischeri. Linear model was constructed using five descriptors resulting in high accuracy prediction of 0.906. The model performance and stability were ascertained using k-fold cross validation method. The selected descriptors set from the linear model was then used in multilayer perceptron (MLP) technique to develop the non-linear model, the accuracy of the model was further enhanced achieving high correlation coefficient with the lowest value being 0.961 with the highest mean square error of 0.157. © 2016 Elsevier Ltd Elsevier Ltd 2017 Article PeerReviewed Ghanem, O.B. and Mutalib, M.I.A. and Lévêque, J.-M. and El-Harbawi, M. (2017) Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors. Chemosphere, 170. pp. 242-250. https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006699372&doi=10.1016%2fj.chemosphere.2016.12.003&partnerID=40&md5=f32e8a98611fc97fd0476f9ea6b323d7
institution Universiti Teknologi Petronas
building UTP Resource Centre
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Petronas
content_source UTP Institutional Repository
url_provider http://eprints.utp.edu.my/
description Ionic liquids (ILs) are class of solvent whose properties can be modified and tuned to meet industrial requirements. However, a high number of potentially available cations and anions leads to an even increasing members of newly-synthesized ionic liquids, adding to the complexity of understanding on their impact on aquatic organisms. Quantitative structure activity∖property relationship (QSAR∖QSPR) technique has been proven to be a useful method for toxicity prediction. In this work,σ-profile descriptors were used to build linear and non-linear QSAR models to predict the ecotoxicities of a wide variety of ILs towards bioluminescent bacterium Vibrio fischeri. Linear model was constructed using five descriptors resulting in high accuracy prediction of 0.906. The model performance and stability were ascertained using k-fold cross validation method. The selected descriptors set from the linear model was then used in multilayer perceptron (MLP) technique to develop the non-linear model, the accuracy of the model was further enhanced achieving high correlation coefficient with the lowest value being 0.961 with the highest mean square error of 0.157. © 2016 Elsevier Ltd
format Article
author Ghanem, O.B.
Mutalib, M.I.A.
Lévêque, J.-M.
El-Harbawi, M.
spellingShingle Ghanem, O.B.
Mutalib, M.I.A.
Lévêque, J.-M.
El-Harbawi, M.
Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors
author_facet Ghanem, O.B.
Mutalib, M.I.A.
Lévêque, J.-M.
El-Harbawi, M.
author_sort Ghanem, O.B.
title Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors
title_short Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors
title_full Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors
title_fullStr Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors
title_full_unstemmed Development of QSAR model to predict the ecotoxicity of Vibrio fischeri using COSMO-RS descriptors
title_sort development of qsar model to predict the ecotoxicity of vibrio fischeri using cosmo-rs descriptors
publisher Elsevier Ltd
publishDate 2017
url http://scholars.utp.edu.my/id/eprint/19760/
https://www.scopus.com/inward/record.uri?eid=2-s2.0-85006699372&doi=10.1016%2fj.chemosphere.2016.12.003&partnerID=40&md5=f32e8a98611fc97fd0476f9ea6b323d7
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