An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging

Segmentation methods are so much efficient to segment complex tumor from challenging datasets. MACCAI BRATS 2013-2017 brain tumor dataset (FLAIR, T2) had been taken for high grade glioma (HGG). This data set is challenging to segment tumor due to homogenous intensity and difficult to separate tumor...

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Main Authors: Khurram, Ejaz, Mohd. Rahim, Mohd. Shafy, Ijaz, Bajwa Usama, Nadim, Rana, Amjad, Rehman
Format: Conference or Workshop Item
Published: 2019
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Online Access:http://eprints.utm.my/id/eprint/97078/
http://dx.doi.org/10.1145/3314367.3314384
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spelling my.utm.970782022-09-23T01:17:41Z http://eprints.utm.my/id/eprint/97078/ An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging Khurram, Ejaz Mohd. Rahim, Mohd. Shafy Ijaz, Bajwa Usama Nadim, Rana Amjad, Rehman QA75 Electronic computers. Computer science Segmentation methods are so much efficient to segment complex tumor from challenging datasets. MACCAI BRATS 2013-2017 brain tumor dataset (FLAIR, T2) had been taken for high grade glioma (HGG). This data set is challenging to segment tumor due to homogenous intensity and difficult to separate tumor boundary from other normal tissues, so our goal is to segment tumor from mixed intensities. It can be accomplished step by step. Therefore image maximum and minimum intensities has been adjusted because need to highlight the tumor portion then thresholding perform to localize the tumor region, has applied statistical features(kurtosis, skewness, mean and variance) so tumor portion become more visualize but cann't separate tumor from boundary and then apply unsupervised clusters like kmean but it gives hard crisp membership and many tumor membership missed so texture features(Correlation, energy, homogeneity and contrast) with combination of Gabor filter has been applied but dimension of data increase and intensities became disturb due high dimension operation over MRI. Tumor boundary become more visualize if combine FLAIR over T2 sequence image then we apply FCM and result is: tumor boundaries become more visualized then applied one statistical feature (Kurtosis) and one texture feature(Energy) so tumor portion separate from other tissue and better segmentation accuracy have been checked with comparison parameters like dice overlap and Jaccard index. 2019 Conference or Workshop Item PeerReviewed Khurram, Ejaz and Mohd. Rahim, Mohd. Shafy and Ijaz, Bajwa Usama and Nadim, Rana and Amjad, Rehman (2019) An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging. In: 9th International Conference on Bioscience, Biochemistry and Bioinformatics, ICBBB 2019, 7 - 9 January 2019, Singapore. http://dx.doi.org/10.1145/3314367.3314384
institution Universiti Teknologi Malaysia
building UTM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Malaysia
content_source UTM Institutional Repository
url_provider http://eprints.utm.my/
topic QA75 Electronic computers. Computer science
spellingShingle QA75 Electronic computers. Computer science
Khurram, Ejaz
Mohd. Rahim, Mohd. Shafy
Ijaz, Bajwa Usama
Nadim, Rana
Amjad, Rehman
An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
description Segmentation methods are so much efficient to segment complex tumor from challenging datasets. MACCAI BRATS 2013-2017 brain tumor dataset (FLAIR, T2) had been taken for high grade glioma (HGG). This data set is challenging to segment tumor due to homogenous intensity and difficult to separate tumor boundary from other normal tissues, so our goal is to segment tumor from mixed intensities. It can be accomplished step by step. Therefore image maximum and minimum intensities has been adjusted because need to highlight the tumor portion then thresholding perform to localize the tumor region, has applied statistical features(kurtosis, skewness, mean and variance) so tumor portion become more visualize but cann't separate tumor from boundary and then apply unsupervised clusters like kmean but it gives hard crisp membership and many tumor membership missed so texture features(Correlation, energy, homogeneity and contrast) with combination of Gabor filter has been applied but dimension of data increase and intensities became disturb due high dimension operation over MRI. Tumor boundary become more visualize if combine FLAIR over T2 sequence image then we apply FCM and result is: tumor boundaries become more visualized then applied one statistical feature (Kurtosis) and one texture feature(Energy) so tumor portion separate from other tissue and better segmentation accuracy have been checked with comparison parameters like dice overlap and Jaccard index.
format Conference or Workshop Item
author Khurram, Ejaz
Mohd. Rahim, Mohd. Shafy
Ijaz, Bajwa Usama
Nadim, Rana
Amjad, Rehman
author_facet Khurram, Ejaz
Mohd. Rahim, Mohd. Shafy
Ijaz, Bajwa Usama
Nadim, Rana
Amjad, Rehman
author_sort Khurram, Ejaz
title An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
title_short An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
title_full An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
title_fullStr An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
title_full_unstemmed An unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
title_sort unsupervised learning with feature approach for brain tumor segmentation using magnetic resonance imaging
publishDate 2019
url http://eprints.utm.my/id/eprint/97078/
http://dx.doi.org/10.1145/3314367.3314384
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score 13.18916