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Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect

Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (= KCTC 42709 = DSM...

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Main Authors: Selvaratnam, C., Thevarajoo, S., Ee, R., Chan, K. G., Bennett, J. P., Goh, K. M., Chong, C. S.
Format: Article
Published: Elsevier B.V. 2016
Subjects:
QH301 Biology
Online Access:http://eprints.utm.my/id/eprint/72281/
https://www.scopus.com/inward/record.uri?eid=2-s2.0-84963988110&doi=10.1016%2fj.margen.2016.04.004&partnerID=40&md5=fb4ff335d807853005a0b17f289db22f
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spelling my.utm.722812017-11-20T08:18:52Z http://eprints.utm.my/id/eprint/72281/ Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect Selvaratnam, C. Thevarajoo, S. Ee, R. Chan, K. G. Bennett, J. P. Goh, K. M. Chong, C. S. QH301 Biology Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (= KCTC 42709 = DSM 101709), with a genome size of approximately 4.08 Mbp and G + C content of 39.18%. Genome sequence analysis of strain D-25 revealed the presence of genes related to petroleum hydrocarbon degradation, 2,4,6-trinitrotoluene detoxification, heavy metals bioremediation and production of carotenoids, which shed light on the potential application of this strain. Elsevier B.V. 2016 Article PeerReviewed Selvaratnam, C. and Thevarajoo, S. and Ee, R. and Chan, K. G. and Bennett, J. P. and Goh, K. M. and Chong, C. S. (2016) Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect. Marine Genomics, 28 . pp. 29-31. ISSN 1874-7787 https://www.scopus.com/inward/record.uri?eid=2-s2.0-84963988110&doi=10.1016%2fj.margen.2016.04.004&partnerID=40&md5=fb4ff335d807853005a0b17f289db22f
institution Universiti Teknologi Malaysia
building UTM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Malaysia
content_source UTM Institutional Repository
url_provider http://eprints.utm.my/
topic QH301 Biology
spellingShingle QH301 Biology
Selvaratnam, C.
Thevarajoo, S.
Ee, R.
Chan, K. G.
Bennett, J. P.
Goh, K. M.
Chong, C. S.
Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
description Roseivirga sp. strain D-25 is an aerobic marine bacterium isolated from seawater collected from Desaru beach, Malaysia. To date, the genus Roseivirga consists of only four species with no genome sequence reported. Here, we present the genome sequence of Roseivirga sp. strain D-25 (= KCTC 42709 = DSM 101709), with a genome size of approximately 4.08 Mbp and G + C content of 39.18%. Genome sequence analysis of strain D-25 revealed the presence of genes related to petroleum hydrocarbon degradation, 2,4,6-trinitrotoluene detoxification, heavy metals bioremediation and production of carotenoids, which shed light on the potential application of this strain.
format Article
author Selvaratnam, C.
Thevarajoo, S.
Ee, R.
Chan, K. G.
Bennett, J. P.
Goh, K. M.
Chong, C. S.
author_facet Selvaratnam, C.
Thevarajoo, S.
Ee, R.
Chan, K. G.
Bennett, J. P.
Goh, K. M.
Chong, C. S.
author_sort Selvaratnam, C.
title Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
title_short Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
title_full Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
title_fullStr Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
title_full_unstemmed Genome sequence of Roseivirga sp. strain D-25 and its potential applications from the genomic aspect
title_sort genome sequence of roseivirga sp. strain d-25 and its potential applications from the genomic aspect
publisher Elsevier B.V.
publishDate 2016
url http://eprints.utm.my/id/eprint/72281/
https://www.scopus.com/inward/record.uri?eid=2-s2.0-84963988110&doi=10.1016%2fj.margen.2016.04.004&partnerID=40&md5=fb4ff335d807853005a0b17f289db22f
_version_ 1643656400105111552
score 13.2014675

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