Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer
A bacterial strain, designated UTM-3T, isolated from the rhizosphere soil of Artocarpus integer (cempedak) in Malaysia was studied to determine its taxonomic position. Cells were Gramstain-negative, non-spore-forming rods, devoid of flagella and gliding motility, that formed yellowpigmented colonies...
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my.utm.521212019-01-28T04:30:50Z http://eprints.utm.my/id/eprint/52121/ Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer Venil, Chidambaram Kulandaisamy Nordin, Nordiana Zakaria, Zainul Akmar Ahmad, Wan Azlina QD Chemistry A bacterial strain, designated UTM-3T, isolated from the rhizosphere soil of Artocarpus integer (cempedak) in Malaysia was studied to determine its taxonomic position. Cells were Gramstain-negative, non-spore-forming rods, devoid of flagella and gliding motility, that formed yellowpigmented colonies on nutrient agar and contained MK-6 as the predominant menaquinone. Comparative analysis of the 16S rRNA gene sequence of strain UTM-3T with those of the most closely related species showed that the strain constituted a distinct phyletic line within the genus Chryseobacterium with the highest sequence similarities to Chryseobacterium lactis NCTC 11390T, Chryseobacterium viscerum 687B-08T, Chryseobacterium tructae 1084-08T, Chryseobacterium arthrosphaerae CC-VM-7T, Chryseobacterium oncorhynchi 701B-08T, Chryseobacterium vietnamense GIMN1.005T, Chryseobacterium bernardetii NCTC 13530T, Chryseobacterium nakagawai NCTC 13529T, Chryseobacterium gallinarum LMG 27808T, Chryseobacterium culicis R4-1AT, Chryseobacterium flavum CW-E2T, Chryseobacterium aquifrigidense CW9T, Chryseobacterium ureilyticum CCUG 52546T, Chryseobacterium indologenes NBRC 14944T, Chryseobacterium gleum CCUG 14555T, Chryseobacterium jejuense JS17-8T, Chryseobacterium oranimense H8T and Chryseobacterium joostei LMG 18212T. The major whole-cell fatty acids were iso-C15 : 0 and iso-C17 : 1ω9c, followed by summed feature 4 (iso-C15 : 0 2-OH and/or C16 : 1 ω7t) and iso-C17 : 0 3-OH, and the polar lipid profile consisted of phosphatidylethanolamine and several unknown lipids. The DNA G+C content strain UTM-3T was 34.8 mol%. On the basis of the phenotypic and phylogenetic evidence, it is concluded that the isolate represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium artocarpi sp. nov. is proposed. The type strain is UTM-3T (=CECT 8497T=KCTC 32509T). Society for General Microbiology 2014 Article PeerReviewed application/pdf en http://eprints.utm.my/id/eprint/52121/1/WanAzlinaAhmad2014_%20Chryseobacteriumartocarpispnov.pdf Venil, Chidambaram Kulandaisamy and Nordin, Nordiana and Zakaria, Zainul Akmar and Ahmad, Wan Azlina (2014) Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer. International Journal of Systematic and Evolutionary Microbiology, 64 . pp. 3153-3159. ISSN 1466-5026 http://dx.doi.org/10.1099/ijs.0.063594-0 DOI: 10.1099/ijs.0.063594-0 |
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QD Chemistry Venil, Chidambaram Kulandaisamy Nordin, Nordiana Zakaria, Zainul Akmar Ahmad, Wan Azlina Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer |
description |
A bacterial strain, designated UTM-3T, isolated from the rhizosphere soil of Artocarpus integer (cempedak) in Malaysia was studied to determine its taxonomic position. Cells were Gramstain-negative, non-spore-forming rods, devoid of flagella and gliding motility, that formed yellowpigmented colonies on nutrient agar and contained MK-6 as the predominant menaquinone. Comparative analysis of the 16S rRNA gene sequence of strain UTM-3T with those of the most closely related species showed that the strain constituted a distinct phyletic line within the genus Chryseobacterium with the highest sequence similarities to Chryseobacterium lactis NCTC 11390T, Chryseobacterium viscerum 687B-08T, Chryseobacterium tructae 1084-08T, Chryseobacterium arthrosphaerae CC-VM-7T, Chryseobacterium oncorhynchi 701B-08T, Chryseobacterium vietnamense GIMN1.005T, Chryseobacterium bernardetii NCTC 13530T, Chryseobacterium nakagawai NCTC 13529T, Chryseobacterium gallinarum LMG 27808T, Chryseobacterium culicis R4-1AT, Chryseobacterium flavum CW-E2T, Chryseobacterium aquifrigidense CW9T, Chryseobacterium ureilyticum CCUG 52546T, Chryseobacterium indologenes NBRC 14944T, Chryseobacterium gleum CCUG 14555T, Chryseobacterium jejuense JS17-8T, Chryseobacterium oranimense H8T and Chryseobacterium joostei LMG 18212T. The major whole-cell fatty acids were iso-C15 : 0 and iso-C17 : 1ω9c, followed by summed feature 4 (iso-C15 : 0 2-OH and/or C16 : 1 ω7t) and iso-C17 : 0 3-OH, and the polar lipid profile consisted of phosphatidylethanolamine and several unknown lipids. The DNA G+C content strain UTM-3T was 34.8 mol%. On the basis of the phenotypic and phylogenetic evidence, it is concluded that the isolate represents a novel species of the genus Chryseobacterium, for which the name Chryseobacterium artocarpi sp. nov. is proposed. The type strain is UTM-3T (=CECT 8497T=KCTC 32509T). |
format |
Article |
author |
Venil, Chidambaram Kulandaisamy Nordin, Nordiana Zakaria, Zainul Akmar Ahmad, Wan Azlina |
author_facet |
Venil, Chidambaram Kulandaisamy Nordin, Nordiana Zakaria, Zainul Akmar Ahmad, Wan Azlina |
author_sort |
Venil, Chidambaram Kulandaisamy |
title |
Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer |
title_short |
Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer |
title_full |
Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer |
title_fullStr |
Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer |
title_full_unstemmed |
Chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of Artocarpus integer |
title_sort |
chryseobacterium artocarpi sp nov., isolated from the rhizosphere soil of artocarpus integer |
publisher |
Society for General Microbiology |
publishDate |
2014 |
url |
http://eprints.utm.my/id/eprint/52121/1/WanAzlinaAhmad2014_%20Chryseobacteriumartocarpispnov.pdf http://eprints.utm.my/id/eprint/52121/ http://dx.doi.org/10.1099/ijs.0.063594-0 |
_version_ |
1643653157470863360 |
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13.160551 |