A protein short motif search tool using amino acid sequence and their secondary structure assignment

• Main Authors: Venkataraman, Arun, Teong, Han Chew, Mohamed Hussein, Zeti Azura, Shamsir, Mohd. Shahir
• Format: Article
• Language: English
• Published: National Center for Biotechnology Information 2007
• Subjects: Q Science (General)
• Online Access: http://eprints.utm.my/id/eprint/37545/1/MohdShahirShamsir2011_AProteinShortMotifSearchTool.pdf; http://eprints.utm.my/id/eprint/37545/; http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3280500/pdf/97320630007304.pdf

We present the development of a web server, a protein short motif search tool that allows users to simultaneously search for a protein sequence motif and its secondary structure assignments. The web server is able to query very short motifs searches against PDB structural data from the RCSB Protein...