Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis
C. parapsilosis and C. orthopsilosis emerged as fungal pathogen with significant worldwide prevalence, particularly in causing nosocomial and skin infections. In this study, we aimed to develop molecular assay based on real-time PCR for sensitive and accurate detection of C. parapsilosis and C. orth...
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The Journal of Bioscience and Medicine
2012
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my.utm.311252019-01-28T03:47:04Z http://eprints.utm.my/id/eprint/31125/ Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis Chan, Giek Far Hasan, Nor Zurairah Sinniah, Sivaranjini Q Science C. parapsilosis and C. orthopsilosis emerged as fungal pathogen with significant worldwide prevalence, particularly in causing nosocomial and skin infections. In this study, we aimed to develop molecular assay based on real-time PCR for sensitive and accurate detection of C. parapsilosis and C. orthopsilosis. A pair of primers that specifically target on both of these yeast species was designed and real-time PCR amplification assay was optimized using EvaGreen as the DNA binding dye. The optimized assay could detect and quantify up to 1 pg concentration of C. parapsilosis and C. orthopsilosis DNA with amplification efficiency of 104% and 103%, respectively. Both the designed primers and the quantitative assay will have a great potential as molecular diagnosis tool for early detection of fungal infection caused by either C. parapsilosis or C. orthopsilosis, which merits future clinical study prior to use in diagnosis. The Journal of Bioscience and Medicine 2012 Article PeerReviewed Chan, Giek Far and Hasan, Nor Zurairah and Sinniah, Sivaranjini (2012) Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis. Journal of Bioscience and Medicine, 2 (1). pp. 1-3. ISSN 2161-2625 http://www.jbscience.org/index.php?journal=jbscience&page=article&op=view&path[]=69 |
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Q Science Chan, Giek Far Hasan, Nor Zurairah Sinniah, Sivaranjini Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis |
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C. parapsilosis and C. orthopsilosis emerged as fungal pathogen with significant worldwide prevalence, particularly in causing nosocomial and skin infections. In this study, we aimed to develop molecular assay based on real-time PCR for sensitive and accurate detection of C. parapsilosis and C. orthopsilosis. A pair of primers that specifically target on both of these yeast species was designed and real-time PCR amplification assay was optimized using EvaGreen as the DNA binding dye. The optimized assay could detect and quantify up to 1 pg concentration of C. parapsilosis and C. orthopsilosis DNA with amplification efficiency of 104% and 103%, respectively. Both the designed primers and the quantitative assay will have a great potential as molecular diagnosis tool for early detection of fungal infection caused by either C. parapsilosis or C. orthopsilosis, which merits future clinical study prior to use in diagnosis. |
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Article |
author |
Chan, Giek Far Hasan, Nor Zurairah Sinniah, Sivaranjini |
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Chan, Giek Far Hasan, Nor Zurairah Sinniah, Sivaranjini |
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Chan, Giek Far |
title |
Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis |
title_short |
Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis |
title_full |
Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis |
title_fullStr |
Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis |
title_full_unstemmed |
Real-Time PCR assay for detection of candida parap-silosis and candida orthopsilosis |
title_sort |
real-time pcr assay for detection of candida parap-silosis and candida orthopsilosis |
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The Journal of Bioscience and Medicine |
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2012 |
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http://eprints.utm.my/id/eprint/31125/ http://www.jbscience.org/index.php?journal=jbscience&page=article&op=view&path[]=69 |
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13.211869 |