Pairwise protein substring alignment with latent semantic analysis and support vector machines to detect remote protein homology

• Main Authors: Ismail, S., Othman, Muhamad Razib, Kasim, S.
• Format: Book Section
• Published: Springer Berlin Heidelberg 2011
• Subjects: QA75 Electronic computers. Computer science
• Online Access: http://eprints.utm.my/id/eprint/29519/; http://dx.doi.org/10.1007/978-3-642-20998-7_60

Remote protein homology detection has been widely used as a part of the analysis of protein structure and function. In this study, the good quality of protein feature vectors is the main aspect to detect remote protein homology; as it will assist discriminative classifier model to discriminate all t...