Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation

Luteibacter is a bacterial genus affiliated to Rhodanobacteraceae family with five species reported up to date. Currently, limited information regarding this genus was revealed, especially on its genomic perspective and its potential application. Here, we present the whole genome sequence of Luteiba...

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Main Authors: Lam, Ming Quan, Ee, Kah Yaw, Tan, Eddie Ti Tjih, Chong, Chun Shiong
Format: Article
Published: Elsevier Inc. 2022
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Online Access:http://eprints.utm.my/104224/
http://dx.doi.org/10.1016/j.genrep.2022.101708
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spelling my.utm.1042242024-01-18T00:31:10Z http://eprints.utm.my/104224/ Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation Lam, Ming Quan Ee, Kah Yaw Tan, Eddie Ti Tjih Chong, Chun Shiong QD Chemistry Luteibacter is a bacterial genus affiliated to Rhodanobacteraceae family with five species reported up to date. Currently, limited information regarding this genus was revealed, especially on its genomic perspective and its potential application. Here, we present the whole genome sequence of Luteibacter sp. CQ10, which the strain was isolated from mangrove bark collected at Tanjung Piai National Park, Johor, Malaysia. The genome of Luteibacter sp. CQ10 contains 30 contigs, with a genome size of 4.87 Mbp, a GC content of 66.44 % and a total of 4197 predicted genes. The preliminary analysis elucidated that a total of 10 and 22 annotated genes were predicted to participate in biosynthesis of antioxidants and production of lignocellulolytic enzymes, respectively. These biomolecules are beneficial to the food and biorefinery industries. Elsevier Inc. 2022 Article PeerReviewed Lam, Ming Quan and Ee, Kah Yaw and Tan, Eddie Ti Tjih and Chong, Chun Shiong (2022) Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation. Gene Reports, 29 (NA). pp. 1-5. ISSN 2452-0144 http://dx.doi.org/10.1016/j.genrep.2022.101708 DOI : 10.1016/j.genrep.2022.101708
institution Universiti Teknologi Malaysia
building UTM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Malaysia
content_source UTM Institutional Repository
url_provider http://eprints.utm.my/
topic QD Chemistry
spellingShingle QD Chemistry
Lam, Ming Quan
Ee, Kah Yaw
Tan, Eddie Ti Tjih
Chong, Chun Shiong
Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation
description Luteibacter is a bacterial genus affiliated to Rhodanobacteraceae family with five species reported up to date. Currently, limited information regarding this genus was revealed, especially on its genomic perspective and its potential application. Here, we present the whole genome sequence of Luteibacter sp. CQ10, which the strain was isolated from mangrove bark collected at Tanjung Piai National Park, Johor, Malaysia. The genome of Luteibacter sp. CQ10 contains 30 contigs, with a genome size of 4.87 Mbp, a GC content of 66.44 % and a total of 4197 predicted genes. The preliminary analysis elucidated that a total of 10 and 22 annotated genes were predicted to participate in biosynthesis of antioxidants and production of lignocellulolytic enzymes, respectively. These biomolecules are beneficial to the food and biorefinery industries.
format Article
author Lam, Ming Quan
Ee, Kah Yaw
Tan, Eddie Ti Tjih
Chong, Chun Shiong
author_facet Lam, Ming Quan
Ee, Kah Yaw
Tan, Eddie Ti Tjih
Chong, Chun Shiong
author_sort Lam, Ming Quan
title Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation
title_short Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation
title_full Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation
title_fullStr Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation
title_full_unstemmed Genome sequence analysis of halophilic Luteibacter sp. CQ10 to prospect its dual roles in antioxidants production and lignocellulose degradation
title_sort genome sequence analysis of halophilic luteibacter sp. cq10 to prospect its dual roles in antioxidants production and lignocellulose degradation
publisher Elsevier Inc.
publishDate 2022
url http://eprints.utm.my/104224/
http://dx.doi.org/10.1016/j.genrep.2022.101708
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score 13.160551