Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis

In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 proteincoding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome...

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Main Authors: Miga, Marylin, Jahar, Puteri Nur Syahzanani, Sivachandran Parimannan, Sivachandran Parimannan, Rajandasb, Heera, Latiff, Muhammad Abu Bakar, Yap Jing Wei, Yap Jing Wei, Shamsir, Mohd Shahir, Mohd Salleh, Faezah
Format: Article
Language:English
Published: Tayler & Francis 2023
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Online Access:http://eprints.uthm.edu.my/8604/1/J15813_2a1312a3edeb59d651d494bdfa277782.pdf
http://eprints.uthm.edu.my/8604/
https://doi.org/10.1080/23802359.2023.2179355
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spelling my.uthm.eprints.86042023-05-02T02:10:54Z http://eprints.uthm.edu.my/8604/ Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis Miga, Marylin Jahar, Puteri Nur Syahzanani Sivachandran Parimannan, Sivachandran Parimannan Rajandasb, Heera Latiff, Muhammad Abu Bakar Yap Jing Wei, Yap Jing Wei Shamsir, Mohd Shahir Mohd Salleh, Faezah T Technology (General) In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 proteincoding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome length of 15,545bp. All protein-coding genes were initiated by the typical ATN codon except nad3 and nad1, which utilizes the TTG codon. Four protein-coding genes (cox1, cox2, cox3 and nad5) are terminated by an incomplete stop codon T, while others end with either a TAA or TAG codon. The intergenic spacer region, S5, is absent in this mitogenome, supporting the lack of this region as a specific character in damselflies. Phylogenetic analysis showed that the newly sequenced E. ochracea is phylogenetically closer to E. ornata with a high support value. Tayler & Francis 2023 Article PeerReviewed text en http://eprints.uthm.edu.my/8604/1/J15813_2a1312a3edeb59d651d494bdfa277782.pdf Miga, Marylin and Jahar, Puteri Nur Syahzanani and Sivachandran Parimannan, Sivachandran Parimannan and Rajandasb, Heera and Latiff, Muhammad Abu Bakar and Yap Jing Wei, Yap Jing Wei and Shamsir, Mohd Shahir and Mohd Salleh, Faezah (2023) Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis. MITOGENOME ANNOUNCEMENT, 8 (2). pp. 1-6. https://doi.org/10.1080/23802359.2023.2179355
institution Universiti Tun Hussein Onn Malaysia
building UTHM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Tun Hussein Onn Malaysia
content_source UTHM Institutional Repository
url_provider http://eprints.uthm.edu.my/
language English
topic T Technology (General)
spellingShingle T Technology (General)
Miga, Marylin
Jahar, Puteri Nur Syahzanani
Sivachandran Parimannan, Sivachandran Parimannan
Rajandasb, Heera
Latiff, Muhammad Abu Bakar
Yap Jing Wei, Yap Jing Wei
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
description In the present study, the nearly complete mitochondrial genome of Euphaea ochracea was described and its phylogenetic position in the family Euphaeidae was analyzed. Here, we recovered 13 proteincoding genes, 22 transfer RNAs, 2 ribosomal RNAs and a partial control region, resulting in a mitogenome length of 15,545bp. All protein-coding genes were initiated by the typical ATN codon except nad3 and nad1, which utilizes the TTG codon. Four protein-coding genes (cox1, cox2, cox3 and nad5) are terminated by an incomplete stop codon T, while others end with either a TAA or TAG codon. The intergenic spacer region, S5, is absent in this mitogenome, supporting the lack of this region as a specific character in damselflies. Phylogenetic analysis showed that the newly sequenced E. ochracea is phylogenetically closer to E. ornata with a high support value.
format Article
author Miga, Marylin
Jahar, Puteri Nur Syahzanani
Sivachandran Parimannan, Sivachandran Parimannan
Rajandasb, Heera
Latiff, Muhammad Abu Bakar
Yap Jing Wei, Yap Jing Wei
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
author_facet Miga, Marylin
Jahar, Puteri Nur Syahzanani
Sivachandran Parimannan, Sivachandran Parimannan
Rajandasb, Heera
Latiff, Muhammad Abu Bakar
Yap Jing Wei, Yap Jing Wei
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
author_sort Miga, Marylin
title Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_short Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_full Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_fullStr Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_full_unstemmed Characterization of the nearly complete mitochondrial genome of ochraceous darkies, Euphaea ochracea Selys, 1859 (Odonata: Zygoptera: Euphaeidae) and phylogenetic analysis
title_sort characterization of the nearly complete mitochondrial genome of ochraceous darkies, euphaea ochracea selys, 1859 (odonata: zygoptera: euphaeidae) and phylogenetic analysis
publisher Tayler & Francis
publishDate 2023
url http://eprints.uthm.edu.my/8604/1/J15813_2a1312a3edeb59d651d494bdfa277782.pdf
http://eprints.uthm.edu.my/8604/
https://doi.org/10.1080/23802359.2023.2179355
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