Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia

Ischyja marapok is a moth species from the genus Ischyja, a member of the Lepidoptera family, Erebidae. Due to their wide variation, this family constitutes the largest described species, however, the mitogenome dataset on the genus Ischyja is scarce. Hence, the mitochondrial genome dataset of...

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Main Authors: Miga, Marylin, Jahar, Puteri Nur Syahzanani, Parimannan, Sivachandran, Rajandas, Heera, Abdul-Latif, Muhammad Abu Bakar, Wei, Yap Jing, Shamsir, Mohd Shahir, Mohd Salleh, Faezah
Format: Article
Language:English
Published: Elsevier 2023
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Online Access:http://eprints.uthm.edu.my/11618/1/J16126_feeb6d718eb28267d2e5a4bada381b80.pdf
http://eprints.uthm.edu.my/11618/
https://doi.org/10.1016/j.dib.2023.109253
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spelling my.uthm.eprints.116182024-09-25T07:23:36Z http://eprints.uthm.edu.my/11618/ Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia Miga, Marylin Jahar, Puteri Nur Syahzanani Parimannan, Sivachandran Rajandas, Heera Abdul-Latif, Muhammad Abu Bakar Wei, Yap Jing Shamsir, Mohd Shahir Mohd Salleh, Faezah T Technology (General) Ischyja marapok is a moth species from the genus Ischyja, a member of the Lepidoptera family, Erebidae. Due to their wide variation, this family constitutes the largest described species, however, the mitogenome dataset on the genus Ischyja is scarce. Hence, the mitochondrial genome dataset of Ischyja marapok from Malaysia was completely sequenced using the next-generation sequencing technology, Illumina NovaSeq 6000 and analyzed. The mitogenome has a sequence length of 15,421 bp, consisting of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs) and a control region. The mitogenome is A + T biased (80.6%), with the base composition of A (39.2%), T (41.4%), C (11.9%) and G (7.5%). Among the 13 PCGs, 12 were initiated by the standard ATN codon, except for COX1 which utilizes the CGA start codon. Two PCGs were terminated with an incomplete stop codon T, while others ended with a TAA codon. Phylogenetic tree analyses showed that the sequenced I. marapok resides within the Erebinae subfamily and is closely related to Ischyja manlia (MW664367) with high bootstrap support and posterior probabilities. This dataset presented the mitogenome data of I. marapok from Malaysia, which is valuable for further research of their phylogeny and the diversification of the Ischyja genus. Also, this dataset can be implemented and used as references to assess environmental changes in the terrestrial ecosystem via environmental DNA approaches. The mitogenome of I. marapok is available in GenBank under the accession number ON165249 Elsevier 2023 Article PeerReviewed text en http://eprints.uthm.edu.my/11618/1/J16126_feeb6d718eb28267d2e5a4bada381b80.pdf Miga, Marylin and Jahar, Puteri Nur Syahzanani and Parimannan, Sivachandran and Rajandas, Heera and Abdul-Latif, Muhammad Abu Bakar and Wei, Yap Jing and Shamsir, Mohd Shahir and Mohd Salleh, Faezah (2023) Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia. Data in Brief, 48. pp. 1-11. https://doi.org/10.1016/j.dib.2023.109253
institution Universiti Tun Hussein Onn Malaysia
building UTHM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Tun Hussein Onn Malaysia
content_source UTHM Institutional Repository
url_provider http://eprints.uthm.edu.my/
language English
topic T Technology (General)
spellingShingle T Technology (General)
Miga, Marylin
Jahar, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Abdul-Latif, Muhammad Abu Bakar
Wei, Yap Jing
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
description Ischyja marapok is a moth species from the genus Ischyja, a member of the Lepidoptera family, Erebidae. Due to their wide variation, this family constitutes the largest described species, however, the mitogenome dataset on the genus Ischyja is scarce. Hence, the mitochondrial genome dataset of Ischyja marapok from Malaysia was completely sequenced using the next-generation sequencing technology, Illumina NovaSeq 6000 and analyzed. The mitogenome has a sequence length of 15,421 bp, consisting of 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs) and a control region. The mitogenome is A + T biased (80.6%), with the base composition of A (39.2%), T (41.4%), C (11.9%) and G (7.5%). Among the 13 PCGs, 12 were initiated by the standard ATN codon, except for COX1 which utilizes the CGA start codon. Two PCGs were terminated with an incomplete stop codon T, while others ended with a TAA codon. Phylogenetic tree analyses showed that the sequenced I. marapok resides within the Erebinae subfamily and is closely related to Ischyja manlia (MW664367) with high bootstrap support and posterior probabilities. This dataset presented the mitogenome data of I. marapok from Malaysia, which is valuable for further research of their phylogeny and the diversification of the Ischyja genus. Also, this dataset can be implemented and used as references to assess environmental changes in the terrestrial ecosystem via environmental DNA approaches. The mitogenome of I. marapok is available in GenBank under the accession number ON165249
format Article
author Miga, Marylin
Jahar, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Abdul-Latif, Muhammad Abu Bakar
Wei, Yap Jing
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
author_facet Miga, Marylin
Jahar, Puteri Nur Syahzanani
Parimannan, Sivachandran
Rajandas, Heera
Abdul-Latif, Muhammad Abu Bakar
Wei, Yap Jing
Shamsir, Mohd Shahir
Mohd Salleh, Faezah
author_sort Miga, Marylin
title Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_short Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_full Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_fullStr Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_full_unstemmed Characterization of the complete mitogenome data of Ischyja marapok (Lepidoptera: Noctuoidea: Erebidae) from Malaysia
title_sort characterization of the complete mitogenome data of ischyja marapok (lepidoptera: noctuoidea: erebidae) from malaysia
publisher Elsevier
publishDate 2023
url http://eprints.uthm.edu.my/11618/1/J16126_feeb6d718eb28267d2e5a4bada381b80.pdf
http://eprints.uthm.edu.my/11618/
https://doi.org/10.1016/j.dib.2023.109253
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