Effect of buffer composition on the background activities of choline kinase

Choline kinase has become one of the popular enzymes that has recently been studied extensively as it functions to catalyze the phosphorylation of choline to form phosphocholine in the presence of ATP and magnesium. Choline kinase exists in three isoforms which are CKal, CKa2 and CKp encoded by t...

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Main Author: Yong, Lee Shin
Format: Monograph
Language:English
Published: Pusat Pengajian Sains Kesihatan, Universiti Sains Malaysia 2013
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Online Access:http://eprints.usm.my/58844/1/LEE%20SHIN%20YONG%20-%20e.pdf
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spelling my.usm.eprints.58844 http://eprints.usm.my/58844/ Effect of buffer composition on the background activities of choline kinase Yong, Lee Shin QP501-801 Animal biochemistry Choline kinase has become one of the popular enzymes that has recently been studied extensively as it functions to catalyze the phosphorylation of choline to form phosphocholine in the presence of ATP and magnesium. Choline kinase exists in three isoforms which are CKal, CKa2 and CKp encoded by two separate genes, Chka and Chkfl. Pyruvate kinase-lactate dehydrogenase (PK.-LDH) coupled enzymatic assay was used to determine the activities for hCKa2 and hCKp. Background activity was the activity observed before choline was added into the reaction. The existence of background activity in enzymatic assay of hCKa2 and hCK.p affects the accuracy of measurement for choline kinase. Thus, different buffer systems at pH 8.5 were used to compare the effect of these buffers towards the background activity of hCKa2 and hCKp. The aim of this study was to reduce the background activity of choline kinase by using different buffer systems (pH 8.5) for enzymatic assay. The buffers tested for enzymatic assay were borate, glycine-NaOH, HEPES, Tris-acetate, Tris-maleate and tricine. Kinetic parameters for hCKa2 and hCKp were determined with buffers that removed the background activity of the enzymes. The buffers that abolished the background activity of choline kinase were glycine-NaOH, HEPES and tricine buffers. The highest Vmax for hCKa2 of 87.41 pmol/min/mg with choline as the substrate was obtained in tricine buffer, while HEPES buffer gave the highest Vmax of 41.60 pmol/min/mg for hCKp. With ethanolamine as substrate, the highest Vmax for both hCKa2 and hCKp were obtained in tricine buffer with the values of 37.71 and 13.86 pmol/min/mg respectively. In conclusion, glycine-NaOH, HEPES and tricine buffers were able to remove the background activities of the hCKa2 and hCKp. The activity level of these enzymes were also dependent on the buffer system used in enzymatic assay. Pusat Pengajian Sains Kesihatan, Universiti Sains Malaysia 2013 Monograph NonPeerReviewed application/pdf en http://eprints.usm.my/58844/1/LEE%20SHIN%20YONG%20-%20e.pdf Yong, Lee Shin (2013) Effect of buffer composition on the background activities of choline kinase. Project Report. Pusat Pengajian Sains Kesihatan, Universiti Sains Malaysia. (Submitted)
institution Universiti Sains Malaysia
building Hamzah Sendut Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Sains Malaysia
content_source USM Institutional Repository
url_provider http://eprints.usm.my/
language English
topic QP501-801 Animal biochemistry
spellingShingle QP501-801 Animal biochemistry
Yong, Lee Shin
Effect of buffer composition on the background activities of choline kinase
description Choline kinase has become one of the popular enzymes that has recently been studied extensively as it functions to catalyze the phosphorylation of choline to form phosphocholine in the presence of ATP and magnesium. Choline kinase exists in three isoforms which are CKal, CKa2 and CKp encoded by two separate genes, Chka and Chkfl. Pyruvate kinase-lactate dehydrogenase (PK.-LDH) coupled enzymatic assay was used to determine the activities for hCKa2 and hCKp. Background activity was the activity observed before choline was added into the reaction. The existence of background activity in enzymatic assay of hCKa2 and hCK.p affects the accuracy of measurement for choline kinase. Thus, different buffer systems at pH 8.5 were used to compare the effect of these buffers towards the background activity of hCKa2 and hCKp. The aim of this study was to reduce the background activity of choline kinase by using different buffer systems (pH 8.5) for enzymatic assay. The buffers tested for enzymatic assay were borate, glycine-NaOH, HEPES, Tris-acetate, Tris-maleate and tricine. Kinetic parameters for hCKa2 and hCKp were determined with buffers that removed the background activity of the enzymes. The buffers that abolished the background activity of choline kinase were glycine-NaOH, HEPES and tricine buffers. The highest Vmax for hCKa2 of 87.41 pmol/min/mg with choline as the substrate was obtained in tricine buffer, while HEPES buffer gave the highest Vmax of 41.60 pmol/min/mg for hCKp. With ethanolamine as substrate, the highest Vmax for both hCKa2 and hCKp were obtained in tricine buffer with the values of 37.71 and 13.86 pmol/min/mg respectively. In conclusion, glycine-NaOH, HEPES and tricine buffers were able to remove the background activities of the hCKa2 and hCKp. The activity level of these enzymes were also dependent on the buffer system used in enzymatic assay.
format Monograph
author Yong, Lee Shin
author_facet Yong, Lee Shin
author_sort Yong, Lee Shin
title Effect of buffer composition on the background activities of choline kinase
title_short Effect of buffer composition on the background activities of choline kinase
title_full Effect of buffer composition on the background activities of choline kinase
title_fullStr Effect of buffer composition on the background activities of choline kinase
title_full_unstemmed Effect of buffer composition on the background activities of choline kinase
title_sort effect of buffer composition on the background activities of choline kinase
publisher Pusat Pengajian Sains Kesihatan, Universiti Sains Malaysia
publishDate 2013
url http://eprints.usm.my/58844/1/LEE%20SHIN%20YONG%20-%20e.pdf
http://eprints.usm.my/58844/
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score 13.19449