Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation

Surfactin production genetic locus (sfp) is responsible for the ability of Bacillus subtilis to produce surfactin which is a lipopeptide biosurfactant. This study describesthe utilization of Polymerase Chain Reaction (PCR) of the sfp gene as a method for identifying B. subtilis species which able t...

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Main Author: Shannaq, Mohammed Abdel-Hafiz Faisal
Format: Thesis
Language:English
Published: Universiti Sains Islam Malaysia 2015
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Online Access:http://ddms.usim.edu.my/handle/123456789/8631
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spelling my.usim-86312017-02-27T09:02:49Z Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation Shannaq, Mohammed Abdel-Hafiz Faisal Bacillus subtilis--Biotechnology Biosurfactants Antibiotics--Biotechnology Pharmaceutical biotechnology Surfactin production genetic locus (sfp) is responsible for the ability of Bacillus subtilis to produce surfactin which is a lipopeptide biosurfactant. This study describesthe utilization of Polymerase Chain Reaction (PCR) of the sfp gene as a method for identifying B. subtilis species which able to produce surfactin. Three isolates were selected based on the APi 50 CH/B, haemolytic test, and drop collapse assay. These three isolates were tentatively named as B. subtilis MSH1, B. subtilis MSH2 and B. subtilis MSH3. The phylogenetic analysis of these isolates based on comparisons of 16S rDNA sequences, revealed that the strains were closely related to B. subtilis. The identification of surfactin production was determined based on PCR screening of the sfp gene. We carried out High Performance liquid Chromatography (HPLC) analysis for surfactin identification and quantification and to ensure that the PCR provided accurate results. The three isolates yielded surfactin and a good correlation was observed between PCR and HPLC analysis. Liquid Chromatography-Mass Spectrometry (LC-MS) analysis was utilized to determine molecular mass and structure for each surfactin isoforms of B. subtilis MSH1, MSH2, MSH3 and compared to surfactin standard. The three local isolates of B. subtilis produced series of surfactin isoforms, which have similarity with surfactin standard isoforms. The antibacterial activity of surfactin produced by local isolates was of B. subtilis studied by determination of the minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC). The antibacterial activity of surfactin was effective in all tested pH levels (5-9). The increase in the membrane permeability was evidenced by the increased in the retention of crystal violet dye, and the leakage of cellular membrane which confirmed the ability of surfactin to rupture the membrane cell of pathogenic bacteria. Antibacterial activities of surfactin produced by local isolates of B. subtilis show good potential to be utilized for commercial antibiotic formulation in medical and pharmaceutical purposes. 2015-07-06T02:50:07Z 2015-07-06T02:50:07Z 2014-03 Thesis http://ddms.usim.edu.my/handle/123456789/8631 en Universiti Sains Islam Malaysia
institution Universiti Sains Islam Malaysia
building USIM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universit Sains Islam i Malaysia
content_source USIM Institutional Repository
url_provider http://ddms.usim.edu.my/
language English
topic Bacillus subtilis--Biotechnology
Biosurfactants
Antibiotics--Biotechnology
Pharmaceutical biotechnology
spellingShingle Bacillus subtilis--Biotechnology
Biosurfactants
Antibiotics--Biotechnology
Pharmaceutical biotechnology
Shannaq, Mohammed Abdel-Hafiz Faisal
Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
description Surfactin production genetic locus (sfp) is responsible for the ability of Bacillus subtilis to produce surfactin which is a lipopeptide biosurfactant. This study describesthe utilization of Polymerase Chain Reaction (PCR) of the sfp gene as a method for identifying B. subtilis species which able to produce surfactin. Three isolates were selected based on the APi 50 CH/B, haemolytic test, and drop collapse assay. These three isolates were tentatively named as B. subtilis MSH1, B. subtilis MSH2 and B. subtilis MSH3. The phylogenetic analysis of these isolates based on comparisons of 16S rDNA sequences, revealed that the strains were closely related to B. subtilis. The identification of surfactin production was determined based on PCR screening of the sfp gene. We carried out High Performance liquid Chromatography (HPLC) analysis for surfactin identification and quantification and to ensure that the PCR provided accurate results. The three isolates yielded surfactin and a good correlation was observed between PCR and HPLC analysis. Liquid Chromatography-Mass Spectrometry (LC-MS) analysis was utilized to determine molecular mass and structure for each surfactin isoforms of B. subtilis MSH1, MSH2, MSH3 and compared to surfactin standard. The three local isolates of B. subtilis produced series of surfactin isoforms, which have similarity with surfactin standard isoforms. The antibacterial activity of surfactin produced by local isolates was of B. subtilis studied by determination of the minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC). The antibacterial activity of surfactin was effective in all tested pH levels (5-9). The increase in the membrane permeability was evidenced by the increased in the retention of crystal violet dye, and the leakage of cellular membrane which confirmed the ability of surfactin to rupture the membrane cell of pathogenic bacteria. Antibacterial activities of surfactin produced by local isolates of B. subtilis show good potential to be utilized for commercial antibiotic formulation in medical and pharmaceutical purposes.
format Thesis
author Shannaq, Mohammed Abdel-Hafiz Faisal
author_facet Shannaq, Mohammed Abdel-Hafiz Faisal
author_sort Shannaq, Mohammed Abdel-Hafiz Faisal
title Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
title_short Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
title_full Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
title_fullStr Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
title_full_unstemmed Exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
title_sort exploitation of novel local isolates of bacillus subtilis for surfactin yield and isoforms production investigation
publisher Universiti Sains Islam Malaysia
publishDate 2015
url http://ddms.usim.edu.my/handle/123456789/8631
_version_ 1645152450853732352
score 13.214268