Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development

Magnaporthe oryzae is important fungal pathogen that caused serious rice blast disease worldwide. The disease cycle of M. oryzae is unique, required appressorium in order to penetrate the host cells. Appressorium is critical structure to cause disease but metabolites produced during appressorium dev...

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Main Author: Md Zain, Azian
Format: Thesis
Language:English
Published: 2020
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Online Access:http://psasir.upm.edu.my/id/eprint/92803/1/FBSB%202021%2011%20IR.pdf
http://psasir.upm.edu.my/id/eprint/92803/
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spelling my.upm.eprints.928032022-05-11T00:12:34Z http://psasir.upm.edu.my/id/eprint/92803/ Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development Md Zain, Azian Magnaporthe oryzae is important fungal pathogen that caused serious rice blast disease worldwide. The disease cycle of M. oryzae is unique, required appressorium in order to penetrate the host cells. Appressorium is critical structure to cause disease but metabolites produced during appressorium development is poorly understood. To date, there is limited information on fungal metabolites and their functions produced by M. oryzae during appressoria development. Therefore, the aim of this study was to determine metabolites produced by M. oryzae during appressorium development in vitro and revealed important metabolic pathways involved. Untargeted metabolomics of Proton Nuclear Magnetic Resonance (1H NMR) was used to determine metabolites from M. oryzae extracts and any metabolite changes was observed during 0 h, 8 h and 24 h development stage. Spectra of 1H NMR were analyzed using multivariate data analysis (MVDA) and model validation was studied. Rich numbers of primary metabolites were detected from 1H NMR spectra and there were 43 metabolites identified putatively based on metabolomics library and previous reports. Partial least square discriminant analysis (PLS-DA) disclosed metabolites pattern among 0 h, 8 h, 24 h and mycelia. Metabolites that showed significant changes (p < 0.05) among groups of 0 h, 8 h, 24 h and mycelia including butyrate, leucine, isoleucine, valine, isobutyrate, ethanol, methylmalonate, threonine, lactate, alanine, lysine, arginine, 4-aminobutyrate, glutamate, homoserine, isocitrate, glutamine, choline, glucose, xylose, mannose, glycerol, mannitol, glucitol, tyrosine, sucrose and tryptophan. Orthogonal projections to latent structures discriminant analysis (OPLS-DA) revealed metabolites produced during each time-point of 0 h, 8 h, 24 h. Number of metabolites at 8 h and 24 h were produced the highest compared to 0 h. Then, metabolomics pathway analysis (MetPa 4.0) from Metaboanalyst.ca was used to illustrate metabolic pathways involved during appressorium development. There were eight key metabolic pathways that highly involved during appressorium development including amino acids, carbohydrates and lipid metabolisms. Fungal metabolites produced by M. oryzae have potential for targeted metabolomics to target specific metabolite or pathways required for pathogenicity thus provide opportunity in developing inhibitors for rice blast disease. 2020-06 Thesis NonPeerReviewed text en http://psasir.upm.edu.my/id/eprint/92803/1/FBSB%202021%2011%20IR.pdf Md Zain, Azian (2020) Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development. Masters thesis, Universiti Putra Malaysia. Rice blast disease Rice - Diseases and pests Metabolites
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
topic Rice blast disease
Rice - Diseases and pests
Metabolites
spellingShingle Rice blast disease
Rice - Diseases and pests
Metabolites
Md Zain, Azian
Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development
description Magnaporthe oryzae is important fungal pathogen that caused serious rice blast disease worldwide. The disease cycle of M. oryzae is unique, required appressorium in order to penetrate the host cells. Appressorium is critical structure to cause disease but metabolites produced during appressorium development is poorly understood. To date, there is limited information on fungal metabolites and their functions produced by M. oryzae during appressoria development. Therefore, the aim of this study was to determine metabolites produced by M. oryzae during appressorium development in vitro and revealed important metabolic pathways involved. Untargeted metabolomics of Proton Nuclear Magnetic Resonance (1H NMR) was used to determine metabolites from M. oryzae extracts and any metabolite changes was observed during 0 h, 8 h and 24 h development stage. Spectra of 1H NMR were analyzed using multivariate data analysis (MVDA) and model validation was studied. Rich numbers of primary metabolites were detected from 1H NMR spectra and there were 43 metabolites identified putatively based on metabolomics library and previous reports. Partial least square discriminant analysis (PLS-DA) disclosed metabolites pattern among 0 h, 8 h, 24 h and mycelia. Metabolites that showed significant changes (p < 0.05) among groups of 0 h, 8 h, 24 h and mycelia including butyrate, leucine, isoleucine, valine, isobutyrate, ethanol, methylmalonate, threonine, lactate, alanine, lysine, arginine, 4-aminobutyrate, glutamate, homoserine, isocitrate, glutamine, choline, glucose, xylose, mannose, glycerol, mannitol, glucitol, tyrosine, sucrose and tryptophan. Orthogonal projections to latent structures discriminant analysis (OPLS-DA) revealed metabolites produced during each time-point of 0 h, 8 h, 24 h. Number of metabolites at 8 h and 24 h were produced the highest compared to 0 h. Then, metabolomics pathway analysis (MetPa 4.0) from Metaboanalyst.ca was used to illustrate metabolic pathways involved during appressorium development. There were eight key metabolic pathways that highly involved during appressorium development including amino acids, carbohydrates and lipid metabolisms. Fungal metabolites produced by M. oryzae have potential for targeted metabolomics to target specific metabolite or pathways required for pathogenicity thus provide opportunity in developing inhibitors for rice blast disease.
format Thesis
author Md Zain, Azian
author_facet Md Zain, Azian
author_sort Md Zain, Azian
title Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development
title_short Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development
title_full Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development
title_fullStr Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development
title_full_unstemmed Investigation of metabolites produced by rice blast fungus, Magnaporthe oryzae during appressorium development
title_sort investigation of metabolites produced by rice blast fungus, magnaporthe oryzae during appressorium development
publishDate 2020
url http://psasir.upm.edu.my/id/eprint/92803/1/FBSB%202021%2011%20IR.pdf
http://psasir.upm.edu.my/id/eprint/92803/
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score 13.211869