Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus

Rhodococci are renowned for their great metabolic repertoire partly because of their numerous putative pathways for large number of specialized metabolites such as biosurfactant. Screening and genome-based assessment for the capacity to produce surface-active molecules was conducted on Rhodococcus s...

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Main Authors: Abdul Habib, Nur Muhamad Syahir, Ahmad, Siti Aqlima, Wan Johari, Wan Lutfi, Abd. Shukor, Mohd Yunus, Yasid, Nur Adeela, Alias, Siti Aisyah, Smykla, Jerzy, Saruni, Nurul Hani, Abdul Razak, Nur Syafiqah
Format: Article
Language:English
Published: Multidisciplinary Digital Publishing Institute 2020
Online Access:http://psasir.upm.edu.my/id/eprint/87319/1/Production%20of%20lipopeptide%20biosurfactant.pdf
http://psasir.upm.edu.my/id/eprint/87319/
https://onlinelibrary.wiley.com/toc/15480569/2018/39/1
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spelling my.upm.eprints.873192022-09-05T04:04:12Z http://psasir.upm.edu.my/id/eprint/87319/ Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus Abdul Habib, Nur Muhamad Syahir Ahmad, Siti Aqlima Wan Johari, Wan Lutfi Abd. Shukor, Mohd Yunus Yasid, Nur Adeela Alias, Siti Aisyah Smykla, Jerzy Saruni, Nurul Hani Abdul Razak, Nur Syafiqah Rhodococci are renowned for their great metabolic repertoire partly because of their numerous putative pathways for large number of specialized metabolites such as biosurfactant. Screening and genome-based assessment for the capacity to produce surface-active molecules was conducted on Rhodococcus sp. ADL36, a diesel-degrading Antarctic bacterium. The strain showed a positive bacterial adhesion to hydrocarbon (BATH) assay, drop collapse test, oil displacement activity, microplate assay, maximal emulsification index at 45% and ability to reduce water surface tension to < 30 mN/m. The evaluation of the cell-free supernatant demonstrated its high stability across the temperature, pH and salinity gradient although no correlation was found between the surface and emulsification activity. Based on the positive relationship between the assessment of macromolecules content and infrared analysis, the extracted biosurfactant synthesized was classified as a lipopeptide. Prediction of the secondary metabolites in the non-ribosomal peptide synthetase (NRPS) clusters suggested the likelihood of the surface-active lipopeptide production in the strain’s genomic data. This is the third report of surface-active lipopeptide producers from this phylotype and the first from the polar region. The lipopeptide synthesized by ADL36 has the prospect to be an Antarctic remediation tool while furnishing a distinctive natural product for biotechnological application and research. Multidisciplinary Digital Publishing Institute 2020-08-26 Article PeerReviewed text en http://psasir.upm.edu.my/id/eprint/87319/1/Production%20of%20lipopeptide%20biosurfactant.pdf Abdul Habib, Nur Muhamad Syahir and Ahmad, Siti Aqlima and Wan Johari, Wan Lutfi and Abd. Shukor, Mohd Yunus and Yasid, Nur Adeela and Alias, Siti Aisyah and Smykla, Jerzy and Saruni, Nurul Hani and Abdul Razak, Nur Syafiqah (2020) Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus. International Journal of Molecular Sciences, 21 (17). pp. 1-21. ISSN 1422-0067 https://onlinelibrary.wiley.com/toc/15480569/2018/39/1 10.3390/ijms21176138
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
description Rhodococci are renowned for their great metabolic repertoire partly because of their numerous putative pathways for large number of specialized metabolites such as biosurfactant. Screening and genome-based assessment for the capacity to produce surface-active molecules was conducted on Rhodococcus sp. ADL36, a diesel-degrading Antarctic bacterium. The strain showed a positive bacterial adhesion to hydrocarbon (BATH) assay, drop collapse test, oil displacement activity, microplate assay, maximal emulsification index at 45% and ability to reduce water surface tension to < 30 mN/m. The evaluation of the cell-free supernatant demonstrated its high stability across the temperature, pH and salinity gradient although no correlation was found between the surface and emulsification activity. Based on the positive relationship between the assessment of macromolecules content and infrared analysis, the extracted biosurfactant synthesized was classified as a lipopeptide. Prediction of the secondary metabolites in the non-ribosomal peptide synthetase (NRPS) clusters suggested the likelihood of the surface-active lipopeptide production in the strain’s genomic data. This is the third report of surface-active lipopeptide producers from this phylotype and the first from the polar region. The lipopeptide synthesized by ADL36 has the prospect to be an Antarctic remediation tool while furnishing a distinctive natural product for biotechnological application and research.
format Article
author Abdul Habib, Nur Muhamad Syahir
Ahmad, Siti Aqlima
Wan Johari, Wan Lutfi
Abd. Shukor, Mohd Yunus
Yasid, Nur Adeela
Alias, Siti Aisyah
Smykla, Jerzy
Saruni, Nurul Hani
Abdul Razak, Nur Syafiqah
spellingShingle Abdul Habib, Nur Muhamad Syahir
Ahmad, Siti Aqlima
Wan Johari, Wan Lutfi
Abd. Shukor, Mohd Yunus
Yasid, Nur Adeela
Alias, Siti Aisyah
Smykla, Jerzy
Saruni, Nurul Hani
Abdul Razak, Nur Syafiqah
Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus
author_facet Abdul Habib, Nur Muhamad Syahir
Ahmad, Siti Aqlima
Wan Johari, Wan Lutfi
Abd. Shukor, Mohd Yunus
Yasid, Nur Adeela
Alias, Siti Aisyah
Smykla, Jerzy
Saruni, Nurul Hani
Abdul Razak, Nur Syafiqah
author_sort Abdul Habib, Nur Muhamad Syahir
title Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus
title_short Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus
title_full Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus
title_fullStr Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus
title_full_unstemmed Production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic Rhodococcus
title_sort production of lipopeptide biosurfactant by a hydrocarbon-degrading antarctic rhodococcus
publisher Multidisciplinary Digital Publishing Institute
publishDate 2020
url http://psasir.upm.edu.my/id/eprint/87319/1/Production%20of%20lipopeptide%20biosurfactant.pdf
http://psasir.upm.edu.my/id/eprint/87319/
https://onlinelibrary.wiley.com/toc/15480569/2018/39/1
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