Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches

This study investigates the twitching ability of 28 clinical and five environmental strains of S. maltophilia grown under iron-depleted condition through in-silico, phenotypic and proteomics approaches. Rapid Annotations using Subsystem Technology (RAST) analysis revealed the presence of 21 targets...

Full description

Saved in:
Bibliographic Details
Main Authors: Vasodavan, Kalidasan, Neela, Vasantha Kumari
Format: Article
Published: Landes Bioscience 2020
Online Access:http://psasir.upm.edu.my/id/eprint/86409/
https://www.tandfonline.com/doi/full/10.1080/21505594.2020.1713649
Tags: Add Tag
No Tags, Be the first to tag this record!
id my.upm.eprints.86409
record_format eprints
spelling my.upm.eprints.864092022-10-19T01:30:34Z http://psasir.upm.edu.my/id/eprint/86409/ Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches Vasodavan, Kalidasan Neela, Vasantha Kumari This study investigates the twitching ability of 28 clinical and five environmental strains of S. maltophilia grown under iron-depleted condition through in-silico, phenotypic and proteomics approaches. Rapid Annotations using Subsystem Technology (RAST) analysis revealed the presence of 21 targets of type IV pilus shared across S. maltophilia strains K279a, R551-3, D457 and JV3. The macroscopic twitching assay showed that only clinical isolates produced a zone of twitching with a mean of 22.00 mm under normal and 25.00 mm under iron-depleted conditions. (p = 0.002). Environmental isolates did not show any significant twitching activity in both conditions tested. Isobaric Tags for Relative and Absolute Quantification (ITRAQ) analysis showed altered expression of twitching motility protein PilT (99.08-fold change), flagellar biosynthesis protein FliC (20.14-fold change), and fimbrial protein (0.70-fold change) in response to iron-depleted condition. Most of the strains that have the ability to twitch under the normal condition, exhibit enhanced twitching during iron limitation. Landes Bioscience 2020 Article PeerReviewed Vasodavan, Kalidasan and Neela, Vasantha Kumari (2020) Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches. Virulence, 11 (1). 104 - 112. ISSN 2150-5594; ESSN: 2150-5608 https://www.tandfonline.com/doi/full/10.1080/21505594.2020.1713649 10.1080/21505594.2020.1713649
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
description This study investigates the twitching ability of 28 clinical and five environmental strains of S. maltophilia grown under iron-depleted condition through in-silico, phenotypic and proteomics approaches. Rapid Annotations using Subsystem Technology (RAST) analysis revealed the presence of 21 targets of type IV pilus shared across S. maltophilia strains K279a, R551-3, D457 and JV3. The macroscopic twitching assay showed that only clinical isolates produced a zone of twitching with a mean of 22.00 mm under normal and 25.00 mm under iron-depleted conditions. (p = 0.002). Environmental isolates did not show any significant twitching activity in both conditions tested. Isobaric Tags for Relative and Absolute Quantification (ITRAQ) analysis showed altered expression of twitching motility protein PilT (99.08-fold change), flagellar biosynthesis protein FliC (20.14-fold change), and fimbrial protein (0.70-fold change) in response to iron-depleted condition. Most of the strains that have the ability to twitch under the normal condition, exhibit enhanced twitching during iron limitation.
format Article
author Vasodavan, Kalidasan
Neela, Vasantha Kumari
spellingShingle Vasodavan, Kalidasan
Neela, Vasantha Kumari
Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches
author_facet Vasodavan, Kalidasan
Neela, Vasantha Kumari
author_sort Vasodavan, Kalidasan
title Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches
title_short Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches
title_full Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches
title_fullStr Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches
title_full_unstemmed Twitching motility of Stenotrophomonas maltophilia under iron limitation: In-silico, phenotypic and proteomic approaches
title_sort twitching motility of stenotrophomonas maltophilia under iron limitation: in-silico, phenotypic and proteomic approaches
publisher Landes Bioscience
publishDate 2020
url http://psasir.upm.edu.my/id/eprint/86409/
https://www.tandfonline.com/doi/full/10.1080/21505594.2020.1713649
_version_ 1748704625849008128
score 13.160551