Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach

Quantitative structure-retention relationships (QSRRs) have successfully been developed for naturally occurring phenolic compounds in a reversed-phase liquid chromatographic (RPLC) system. A total of 1519 descriptors were calculated from the optimized structures of the molecules using MOPAC2009 and...

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Main Authors: Akbar, Jamshed, Iqbal, Shahid, Batool, Fozia, Karim, Abdul, Chan, Kim Wei
Format: Article
Language:English
Published: MDPI 2012
Online Access:http://psasir.upm.edu.my/id/eprint/78027/1/78027.pdf
http://psasir.upm.edu.my/id/eprint/78027/
https://www.mdpi.com/1422-0067/13/11/15387
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spelling my.upm.eprints.780272020-06-02T03:07:32Z http://psasir.upm.edu.my/id/eprint/78027/ Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach Akbar, Jamshed Iqbal, Shahid Batool, Fozia Karim, Abdul Chan, Kim Wei Quantitative structure-retention relationships (QSRRs) have successfully been developed for naturally occurring phenolic compounds in a reversed-phase liquid chromatographic (RPLC) system. A total of 1519 descriptors were calculated from the optimized structures of the molecules using MOPAC2009 and DRAGON softwares. The data set of 39 molecules was divided into training and external validation sets. For feature selection and mapping we used step-wise multiple linear regression (SMLR), unsupervised forward selection followed by step-wise multiple linear regression (UFS-SMLR) and artificial neural networks (ANN). Stable and robust models with significant predictive abilities in terms of validation statistics were obtained with negation of any chance correlation. ANN models were found better than remaining two approaches. HNar, IDM, Mp, GATS2v, DISP and 3D-MoRSE (signals 22, 28 and 32) descriptors based on van der Waals volume, electronegativity, mass and polarizability, at atomic level, were found to have significant effects on the retention times. The possible implications of these descriptors in RPLC have been discussed. All the models are proven to be quite able to predict the retention times of phenolic compounds and have shown remarkable validation, robustness, stability and predictive performance. MDPI 2012 Article PeerReviewed text en http://psasir.upm.edu.my/id/eprint/78027/1/78027.pdf Akbar, Jamshed and Iqbal, Shahid and Batool, Fozia and Karim, Abdul and Chan, Kim Wei (2012) Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach. International Journal of Molecular Sciences, 13 (11). pp. 15387-15400. ISSN 1661-6596; ESSN: 1422-0067 https://www.mdpi.com/1422-0067/13/11/15387 10.3390/ijms131115387
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
description Quantitative structure-retention relationships (QSRRs) have successfully been developed for naturally occurring phenolic compounds in a reversed-phase liquid chromatographic (RPLC) system. A total of 1519 descriptors were calculated from the optimized structures of the molecules using MOPAC2009 and DRAGON softwares. The data set of 39 molecules was divided into training and external validation sets. For feature selection and mapping we used step-wise multiple linear regression (SMLR), unsupervised forward selection followed by step-wise multiple linear regression (UFS-SMLR) and artificial neural networks (ANN). Stable and robust models with significant predictive abilities in terms of validation statistics were obtained with negation of any chance correlation. ANN models were found better than remaining two approaches. HNar, IDM, Mp, GATS2v, DISP and 3D-MoRSE (signals 22, 28 and 32) descriptors based on van der Waals volume, electronegativity, mass and polarizability, at atomic level, were found to have significant effects on the retention times. The possible implications of these descriptors in RPLC have been discussed. All the models are proven to be quite able to predict the retention times of phenolic compounds and have shown remarkable validation, robustness, stability and predictive performance.
format Article
author Akbar, Jamshed
Iqbal, Shahid
Batool, Fozia
Karim, Abdul
Chan, Kim Wei
spellingShingle Akbar, Jamshed
Iqbal, Shahid
Batool, Fozia
Karim, Abdul
Chan, Kim Wei
Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach
author_facet Akbar, Jamshed
Iqbal, Shahid
Batool, Fozia
Karim, Abdul
Chan, Kim Wei
author_sort Akbar, Jamshed
title Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach
title_short Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach
title_full Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach
title_fullStr Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach
title_full_unstemmed Predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (QSRR) approach
title_sort predicting retention times of naturally occurring phenolic compounds in reversed-phase liquid chromatography: a quantitative structure-retention relationship (qsrr) approach
publisher MDPI
publishDate 2012
url http://psasir.upm.edu.my/id/eprint/78027/1/78027.pdf
http://psasir.upm.edu.my/id/eprint/78027/
https://www.mdpi.com/1422-0067/13/11/15387
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score 13.211869