Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.

In silico analysis showed that the differentially expressed type 3 oil palm metallothionein-like genes MT3-A and MT3-B share at least 11 common putative promoter regulatory elements. The identified motifs include W-boxes, TATCCA element, binding element for cytokinin response regulators and pollen-...

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Main Authors: Ramli, Zubaidah, Abdullah, Siti Nor Akmar
Format: Article
Language:English
English
Published: Springer-Verlag 2010
Online Access:http://psasir.upm.edu.my/id/eprint/14825/1/Functional%20characterization%20of%20the%20oil%20palm%20type%203%20metallothionein.pdf
http://psasir.upm.edu.my/id/eprint/14825/
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spelling my.upm.eprints.148252015-11-02T04:10:26Z http://psasir.upm.edu.my/id/eprint/14825/ Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter. Ramli, Zubaidah Abdullah, Siti Nor Akmar In silico analysis showed that the differentially expressed type 3 oil palm metallothionein-like genes MT3-A and MT3-B share at least 11 common putative promoter regulatory elements. The identified motifs include W-boxes, TATCCA element, binding element for cytokinin response regulators and pollen-specific elements. A high degree of conservation was observed in their genomic organisation where the coding regions are divided at two identical positions in both genes by two AT-rich introns. Promoter activity of the MT3-B gene was analysed using a transient assay by bombarding oil palm tissue slices with a β-glucuronidase (GUS) gene construct and a stable reporter assay by analysing GUS expression in transformed Arabidopsis thaliana plants. Transient expression analysis revealed MT3-B promoter activity in oil palm root tissues but not in fruit mesocarp at 12 weeks after anthesis and spear leaves. The T3 homozygous transgenic Arabidopsis plants, harbouring the MT3-B promoter/GUS construct, showed reporter activity in cotyledons and mature leaves with lower expression levels in root tissues. The expression levels in the roots of the T3 homozygous transgenic plants increased five- and 2.5-folds when treated with 80 μM of Zn2+ and Fe2+, respectively. Altogether, these results indicate that the MT3-A and MT3-B promoter activities may be regulated by a variety of abiotic factors and MT3-B promoter may potentially be manipulated for use in plant genetic engineering for induced synthesis of gene product. Springer-Verlag 2010 Article PeerReviewed application/pdf en http://psasir.upm.edu.my/id/eprint/14825/1/Functional%20characterization%20of%20the%20oil%20palm%20type%203%20metallothionein.pdf Ramli, Zubaidah and Abdullah, Siti Nor Akmar (2010) Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter. Plant Molecular Biology Reporter , 28 (3). pp. 531-541. ISSN 0735-9640 10.1007/s11105-009-0177-1 English
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
English
description In silico analysis showed that the differentially expressed type 3 oil palm metallothionein-like genes MT3-A and MT3-B share at least 11 common putative promoter regulatory elements. The identified motifs include W-boxes, TATCCA element, binding element for cytokinin response regulators and pollen-specific elements. A high degree of conservation was observed in their genomic organisation where the coding regions are divided at two identical positions in both genes by two AT-rich introns. Promoter activity of the MT3-B gene was analysed using a transient assay by bombarding oil palm tissue slices with a β-glucuronidase (GUS) gene construct and a stable reporter assay by analysing GUS expression in transformed Arabidopsis thaliana plants. Transient expression analysis revealed MT3-B promoter activity in oil palm root tissues but not in fruit mesocarp at 12 weeks after anthesis and spear leaves. The T3 homozygous transgenic Arabidopsis plants, harbouring the MT3-B promoter/GUS construct, showed reporter activity in cotyledons and mature leaves with lower expression levels in root tissues. The expression levels in the roots of the T3 homozygous transgenic plants increased five- and 2.5-folds when treated with 80 μM of Zn2+ and Fe2+, respectively. Altogether, these results indicate that the MT3-A and MT3-B promoter activities may be regulated by a variety of abiotic factors and MT3-B promoter may potentially be manipulated for use in plant genetic engineering for induced synthesis of gene product.
format Article
author Ramli, Zubaidah
Abdullah, Siti Nor Akmar
spellingShingle Ramli, Zubaidah
Abdullah, Siti Nor Akmar
Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.
author_facet Ramli, Zubaidah
Abdullah, Siti Nor Akmar
author_sort Ramli, Zubaidah
title Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.
title_short Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.
title_full Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.
title_fullStr Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.
title_full_unstemmed Functional characterization of the oil palm type 3 metallothionein-like gene (MT3-B) promoter.
title_sort functional characterization of the oil palm type 3 metallothionein-like gene (mt3-b) promoter.
publisher Springer-Verlag
publishDate 2010
url http://psasir.upm.edu.my/id/eprint/14825/1/Functional%20characterization%20of%20the%20oil%20palm%20type%203%20metallothionein.pdf
http://psasir.upm.edu.my/id/eprint/14825/
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