A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells

In situ Reverse Transcriptase PCR (in situ RT-PCR) can amplify mRNA and localize gene expression in cells. However, this method is not feasible in fungi as the thick fungal cell wall constitutes a barrier to this procedure. We developed a two step in situ RT-PCR procedure which enabled the detection...

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Main Authors: Yong, Phelim Voon Chen, Ong, Khang Wei, Mohd Sidik, Shiran, Rosli, Rozita, Chong, Pei Pei
Format: Article
Language:English
Published: Elsevier BV 2009
Online Access:http://psasir.upm.edu.my/id/eprint/12728/1/A%20modified%20in%20situ%20RT-PCR%20method%20for%20localizing%20fungal-specific%20gene%20expression%20in%20Candida-infected%20mice%20renal%20cells.pdf
http://psasir.upm.edu.my/id/eprint/12728/
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spelling my.upm.eprints.127282015-11-03T01:45:30Z http://psasir.upm.edu.my/id/eprint/12728/ A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells Yong, Phelim Voon Chen Ong, Khang Wei Mohd Sidik, Shiran Rosli, Rozita Chong, Pei Pei In situ Reverse Transcriptase PCR (in situ RT-PCR) can amplify mRNA and localize gene expression in cells. However, this method is not feasible in fungi as the thick fungal cell wall constitutes a barrier to this procedure. We developed a two step in situ RT-PCR procedure which enabled the detection and localization of Candida tropicalis mRNA expression in formalin-fixed, paraffin-embedded (FFPE) mouse kidney sections. This in situ hybridization study revealed the first direct evidence for deposition of Candida tropicalis secreted aspartic proteinase 2 (CtSAP2) in the tip of pseudohyphae and its involvement in acute systemic candidiasis. We conclude that in situ RT-PCR can be successfully applied to FFPE tissues and will offer new perspectives in studying gene expression in Candida species. Elsevier BV 2009-11 Article PeerReviewed application/pdf en http://psasir.upm.edu.my/id/eprint/12728/1/A%20modified%20in%20situ%20RT-PCR%20method%20for%20localizing%20fungal-specific%20gene%20expression%20in%20Candida-infected%20mice%20renal%20cells.pdf Yong, Phelim Voon Chen and Ong, Khang Wei and Mohd Sidik, Shiran and Rosli, Rozita and Chong, Pei Pei (2009) A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells. Journal of Microbiological Methods, 79 (2). pp. 242-245. ISSN 0167-7012; ESSN: 1872-8359 10.1016/j.mimet.2009.08.019
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
language English
description In situ Reverse Transcriptase PCR (in situ RT-PCR) can amplify mRNA and localize gene expression in cells. However, this method is not feasible in fungi as the thick fungal cell wall constitutes a barrier to this procedure. We developed a two step in situ RT-PCR procedure which enabled the detection and localization of Candida tropicalis mRNA expression in formalin-fixed, paraffin-embedded (FFPE) mouse kidney sections. This in situ hybridization study revealed the first direct evidence for deposition of Candida tropicalis secreted aspartic proteinase 2 (CtSAP2) in the tip of pseudohyphae and its involvement in acute systemic candidiasis. We conclude that in situ RT-PCR can be successfully applied to FFPE tissues and will offer new perspectives in studying gene expression in Candida species.
format Article
author Yong, Phelim Voon Chen
Ong, Khang Wei
Mohd Sidik, Shiran
Rosli, Rozita
Chong, Pei Pei
spellingShingle Yong, Phelim Voon Chen
Ong, Khang Wei
Mohd Sidik, Shiran
Rosli, Rozita
Chong, Pei Pei
A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells
author_facet Yong, Phelim Voon Chen
Ong, Khang Wei
Mohd Sidik, Shiran
Rosli, Rozita
Chong, Pei Pei
author_sort Yong, Phelim Voon Chen
title A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells
title_short A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells
title_full A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells
title_fullStr A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells
title_full_unstemmed A modified in situ RT-PCR method for localizing fungal-specific gene expression in Candida-infected mice renal cells
title_sort modified in situ rt-pcr method for localizing fungal-specific gene expression in candida-infected mice renal cells
publisher Elsevier BV
publishDate 2009
url http://psasir.upm.edu.my/id/eprint/12728/1/A%20modified%20in%20situ%20RT-PCR%20method%20for%20localizing%20fungal-specific%20gene%20expression%20in%20Candida-infected%20mice%20renal%20cells.pdf
http://psasir.upm.edu.my/id/eprint/12728/
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