Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis

<jats:p>Vacuolar processing enzyme (VPE) is a cysteine protease responsible for vacuolar proteins’ maturation and regulation of programmed cell death (PCD). Four isoforms of Arabidopsis thaliana VPEs were identified previously, but only the functions of βVPE, γVPE, and δVPE were determined. Th...

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Main Authors: Tang, Chu-Nie, Wan Abdullah, Wan Muhamad Asrul Nizam, Wee, Chien-Yeong, Balia Yusof, Zetty Norhana, Yap, Wai-Sum, Cheng, Wan-Hee, Baharum, Nadiya Akmal, Ong-Abdullah, Janna, Loh, Jiun-Yan, Lai, Kok-Song
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Published: MDPI 2023
Online Access:http://psasir.upm.edu.my/id/eprint/108971/
https://www.mdpi.com/2079-7737/12/3/430
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spelling my.upm.eprints.1089712024-05-17T02:36:40Z http://psasir.upm.edu.my/id/eprint/108971/ Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis Tang, Chu-Nie Wan Abdullah, Wan Muhamad Asrul Nizam Wee, Chien-Yeong Balia Yusof, Zetty Norhana Yap, Wai-Sum Cheng, Wan-Hee Baharum, Nadiya Akmal Ong-Abdullah, Janna Loh, Jiun-Yan Lai, Kok-Song <jats:p>Vacuolar processing enzyme (VPE) is a cysteine protease responsible for vacuolar proteins’ maturation and regulation of programmed cell death (PCD). Four isoforms of Arabidopsis thaliana VPEs were identified previously, but only the functions of βVPE, γVPE, and δVPE were determined. The specific function of a gene is linked to the cis-acting elements in the promoter region. A promoter analysis found repetitive drought-related cis-elements in αVPE, which highlight its potential involvement in drought regulation in A. thaliana. The further co-expression network portraying genes interacting with αVPE substantiated its drought-regulation-related function. Expression of αVPE was upregulated after drought treatment in A. thaliana. To confirm the role of αVPE, a loss of function study revealed that αVPE knockout mutants remained green compared with WT after drought treatment. The mutants had reduced proline activity, decreased sucrose content, and lower MDA content, but increased photosynthetic pigments, indicating that αVPE negatively regulates drought tolerance in A. thaliana. Taken together, our findings serve as important evidence of the involvement of αVPE in modulating drought tolerance in A. thaliana.</jats:p> MDPI 2023-03-10 Article PeerReviewed Tang, Chu-Nie and Wan Abdullah, Wan Muhamad Asrul Nizam and Wee, Chien-Yeong and Balia Yusof, Zetty Norhana and Yap, Wai-Sum and Cheng, Wan-Hee and Baharum, Nadiya Akmal and Ong-Abdullah, Janna and Loh, Jiun-Yan and Lai, Kok-Song (2023) Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis. Biology, 12 (3). art. no. 430. pp. 1-10. ISSN 2079-7737 https://www.mdpi.com/2079-7737/12/3/430 10.3390/biology12030430
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
description <jats:p>Vacuolar processing enzyme (VPE) is a cysteine protease responsible for vacuolar proteins’ maturation and regulation of programmed cell death (PCD). Four isoforms of Arabidopsis thaliana VPEs were identified previously, but only the functions of βVPE, γVPE, and δVPE were determined. The specific function of a gene is linked to the cis-acting elements in the promoter region. A promoter analysis found repetitive drought-related cis-elements in αVPE, which highlight its potential involvement in drought regulation in A. thaliana. The further co-expression network portraying genes interacting with αVPE substantiated its drought-regulation-related function. Expression of αVPE was upregulated after drought treatment in A. thaliana. To confirm the role of αVPE, a loss of function study revealed that αVPE knockout mutants remained green compared with WT after drought treatment. The mutants had reduced proline activity, decreased sucrose content, and lower MDA content, but increased photosynthetic pigments, indicating that αVPE negatively regulates drought tolerance in A. thaliana. Taken together, our findings serve as important evidence of the involvement of αVPE in modulating drought tolerance in A. thaliana.</jats:p>
format Article
author Tang, Chu-Nie
Wan Abdullah, Wan Muhamad Asrul Nizam
Wee, Chien-Yeong
Balia Yusof, Zetty Norhana
Yap, Wai-Sum
Cheng, Wan-Hee
Baharum, Nadiya Akmal
Ong-Abdullah, Janna
Loh, Jiun-Yan
Lai, Kok-Song
spellingShingle Tang, Chu-Nie
Wan Abdullah, Wan Muhamad Asrul Nizam
Wee, Chien-Yeong
Balia Yusof, Zetty Norhana
Yap, Wai-Sum
Cheng, Wan-Hee
Baharum, Nadiya Akmal
Ong-Abdullah, Janna
Loh, Jiun-Yan
Lai, Kok-Song
Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
author_facet Tang, Chu-Nie
Wan Abdullah, Wan Muhamad Asrul Nizam
Wee, Chien-Yeong
Balia Yusof, Zetty Norhana
Yap, Wai-Sum
Cheng, Wan-Hee
Baharum, Nadiya Akmal
Ong-Abdullah, Janna
Loh, Jiun-Yan
Lai, Kok-Song
author_sort Tang, Chu-Nie
title Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
title_short Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
title_full Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
title_fullStr Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
title_full_unstemmed Promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
title_sort promoter cis-element analyses reveal the function of αvpe in drought stress response of arabidopsis
publisher MDPI
publishDate 2023
url http://psasir.upm.edu.my/id/eprint/108971/
https://www.mdpi.com/2079-7737/12/3/430
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score 13.214268