Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia

Owing to their eccentric thermostable ability, thermophiles are among the most utilized extremophiles in various industries, such as manufacturing, and clinical research. Researchers believe that many unknown thermophiles are yet to be discovered. This study aimed to genotypically characterize the d...

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Main Authors: Seng, Chiew Toh, Sui, Sien Leong, Lahuri, Azizul Hakim, Wai, Cheong Woon
Format: Article
Published: 2023
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Online Access:http://psasir.upm.edu.my/id/eprint/105907/
https://scholarhub.ui.ac.id/science/vol27/iss4/4/
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spelling my.upm.eprints.1059072024-02-28T06:29:26Z http://psasir.upm.edu.my/id/eprint/105907/ Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia Seng, Chiew Toh Sui, Sien Leong Lahuri, Azizul Hakim Wai, Cheong Woon Owing to their eccentric thermostable ability, thermophiles are among the most utilized extremophiles in various industries, such as manufacturing, and clinical research. Researchers believe that many unknown thermophiles are yet to be discovered. This study aimed to genotypically characterize the diversity of thermophiles and screen them for the potential production of enzymes in the recreational hot springs located at Northwest Coast of Borneo. Water samples were collected at 45 °C–50 °C from Annah Rais and Panchor hot springs during the sampling period from January 2018 to January 2019. Three samples (water and sediment) were collected twice in a 3-week interval from each pool of the sampling sites. Each water sample was diluted up to 10−3 and plated on thick nutrient agar at 55 °C for 24 h. Customized nutrient agar plus Bacto-agar plates were used for the optimum growth analysis of the isolates at 40 °C–90 °C for 24 h. The thermophiles were isolated, characterized biochemically, and amplified molecularly using DNA fingerprinting and 16S rRNA gene sequencing. Lipase, protease, gelatinase, amylase, catalase, and nitrate reductase enzymatic production was examined. Twenty-one thermophilic isolates were successfully characterized into seven clusters of Amnoxybacillus spp. and Geobacillus spp. by studying their phylogenetic dendrograms. Isolates AR10 and AR15 could produce most of the tested enzymes. All the isolates showed negative results in gelatinase and lipase production. PC14 was the only isolate that did not produce any of the enzymatic reactions in this experiment. The results showed that most of the thermophiles isolated from the two Borneo hot springs can synthesize enzymes and have potential to be thermostable. In conclusion, the search for the thermophilic producers of novel enzymes in Borneo is successful; further research must focus on their applications. 2023-12 Article PeerReviewed Seng, Chiew Toh and Sui, Sien Leong and Lahuri, Azizul Hakim and Wai, Cheong Woon (2023) Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia. Makara Journal of Science, Vol. 27 (4). art. no. 4. pp. 279-288. ISSN 2356-0851 https://scholarhub.ui.ac.id/science/vol27/iss4/4/ Enzymes Bacteria recreational DOI: 10.7454/mss.v27i4.1449
institution Universiti Putra Malaysia
building UPM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Putra Malaysia
content_source UPM Institutional Repository
url_provider http://psasir.upm.edu.my/
topic Enzymes
Bacteria
recreational
spellingShingle Enzymes
Bacteria
recreational
Seng, Chiew Toh
Sui, Sien Leong
Lahuri, Azizul Hakim
Wai, Cheong Woon
Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia
description Owing to their eccentric thermostable ability, thermophiles are among the most utilized extremophiles in various industries, such as manufacturing, and clinical research. Researchers believe that many unknown thermophiles are yet to be discovered. This study aimed to genotypically characterize the diversity of thermophiles and screen them for the potential production of enzymes in the recreational hot springs located at Northwest Coast of Borneo. Water samples were collected at 45 °C–50 °C from Annah Rais and Panchor hot springs during the sampling period from January 2018 to January 2019. Three samples (water and sediment) were collected twice in a 3-week interval from each pool of the sampling sites. Each water sample was diluted up to 10−3 and plated on thick nutrient agar at 55 °C for 24 h. Customized nutrient agar plus Bacto-agar plates were used for the optimum growth analysis of the isolates at 40 °C–90 °C for 24 h. The thermophiles were isolated, characterized biochemically, and amplified molecularly using DNA fingerprinting and 16S rRNA gene sequencing. Lipase, protease, gelatinase, amylase, catalase, and nitrate reductase enzymatic production was examined. Twenty-one thermophilic isolates were successfully characterized into seven clusters of Amnoxybacillus spp. and Geobacillus spp. by studying their phylogenetic dendrograms. Isolates AR10 and AR15 could produce most of the tested enzymes. All the isolates showed negative results in gelatinase and lipase production. PC14 was the only isolate that did not produce any of the enzymatic reactions in this experiment. The results showed that most of the thermophiles isolated from the two Borneo hot springs can synthesize enzymes and have potential to be thermostable. In conclusion, the search for the thermophilic producers of novel enzymes in Borneo is successful; further research must focus on their applications.
format Article
author Seng, Chiew Toh
Sui, Sien Leong
Lahuri, Azizul Hakim
Wai, Cheong Woon
author_facet Seng, Chiew Toh
Sui, Sien Leong
Lahuri, Azizul Hakim
Wai, Cheong Woon
author_sort Seng, Chiew Toh
title Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia
title_short Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia
title_full Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia
title_fullStr Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia
title_full_unstemmed Enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of Sarawak, Malaysia
title_sort enzymatic screening and genotypic characterization of thermophilic bacteria from the hot springs of sarawak, malaysia
publishDate 2023
url http://psasir.upm.edu.my/id/eprint/105907/
https://scholarhub.ui.ac.id/science/vol27/iss4/4/
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score 13.188404