Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning

Brain tumors are the growth of abnormal cells or a mass in a brain. Numerous kinds of brain tumors were discovered, which need accurate and early detection techniques. Currently, most diagnosis and detection methods rely on the decision of neuro-specialists and radiologists to evaluate brain images,...

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Main Authors: Jwaid W.M., Al-Hussein Z.S.M., Sabry A.H.
Other Authors: 57201441961
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Published: Technology Center 2023
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spelling my.uniten.dspace-264932023-05-29T17:11:11Z Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning Jwaid W.M. Al-Hussein Z.S.M. Sabry A.H. 57201441961 57220009753 56602511900 Brain tumors are the growth of abnormal cells or a mass in a brain. Numerous kinds of brain tumors were discovered, which need accurate and early detection techniques. Currently, most diagnosis and detection methods rely on the decision of neuro-specialists and radiologists to evaluate brain images, which may be timeconsuming and cause human errors. This paper proposes a robust U-Net deep learning Convolutional Neural Network (CNN) model that can classify if the subject has a tumor or not based on Brain Magnetic resonance imaging (MRI) with acceptable accuracy for medical-grade application. The study built and trained the 3D U-Net CNN including encoding/decoding relationship architecture to perform the brain tumor segmentation because it requires fewer training images and provides more precise segmentation. The algorithm consists of three parts; the first part, the downsampling part, the bottleneck part, and the optimum part. The resultant semantic maps are inserted into the decoder fraction to obtain the full-resolution probability maps. The developed U-Net architecture has been applied on the MRI scan brain tumor segmentation dataset in MICCAI BraTS 2017. The results using Matlab-based toolbox indicate that the proposed architecture has been successfully evaluated and experienced for MRI datasets of brain tumor segmentation including 336 images as training data and 125 images for validation. This work demonstrated comparative performance and successful feasibility of implementing U-Net CNN architecture in an automated framework of brain tumor segmentations in Fluid-attenuated inversion recovery (FLAIR) MR Slices. The developed U-Net CNN model succeeded in performing the brain tumor segmentation task to classify the input brain images into a tumor or not based on the MRI dataset � 2021, Authors. This is an open access article under the Creative Commons CC BY license Final 2023-05-29T09:11:11Z 2023-05-29T09:11:11Z 2021 Article 10.15587/1729-4061.2021.238957 2-s2.0-85116055192 https://www.scopus.com/inward/record.uri?eid=2-s2.0-85116055192&doi=10.15587%2f1729-4061.2021.238957&partnerID=40&md5=6eb7c8441d9853f54274d1795ae0d257 https://irepository.uniten.edu.my/handle/123456789/26493 4 9-112 23 31 All Open Access, Gold, Green Technology Center Scopus
institution Universiti Tenaga Nasional
building UNITEN Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Tenaga Nasional
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description Brain tumors are the growth of abnormal cells or a mass in a brain. Numerous kinds of brain tumors were discovered, which need accurate and early detection techniques. Currently, most diagnosis and detection methods rely on the decision of neuro-specialists and radiologists to evaluate brain images, which may be timeconsuming and cause human errors. This paper proposes a robust U-Net deep learning Convolutional Neural Network (CNN) model that can classify if the subject has a tumor or not based on Brain Magnetic resonance imaging (MRI) with acceptable accuracy for medical-grade application. The study built and trained the 3D U-Net CNN including encoding/decoding relationship architecture to perform the brain tumor segmentation because it requires fewer training images and provides more precise segmentation. The algorithm consists of three parts; the first part, the downsampling part, the bottleneck part, and the optimum part. The resultant semantic maps are inserted into the decoder fraction to obtain the full-resolution probability maps. The developed U-Net architecture has been applied on the MRI scan brain tumor segmentation dataset in MICCAI BraTS 2017. The results using Matlab-based toolbox indicate that the proposed architecture has been successfully evaluated and experienced for MRI datasets of brain tumor segmentation including 336 images as training data and 125 images for validation. This work demonstrated comparative performance and successful feasibility of implementing U-Net CNN architecture in an automated framework of brain tumor segmentations in Fluid-attenuated inversion recovery (FLAIR) MR Slices. The developed U-Net CNN model succeeded in performing the brain tumor segmentation task to classify the input brain images into a tumor or not based on the MRI dataset � 2021, Authors. This is an open access article under the Creative Commons CC BY license
author2 57201441961
author_facet 57201441961
Jwaid W.M.
Al-Hussein Z.S.M.
Sabry A.H.
format Article
author Jwaid W.M.
Al-Hussein Z.S.M.
Sabry A.H.
spellingShingle Jwaid W.M.
Al-Hussein Z.S.M.
Sabry A.H.
Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning
author_sort Jwaid W.M.
title Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning
title_short Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning
title_full Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning
title_fullStr Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning
title_full_unstemmed Development of brain tumor segmentation of magnetic resonance imaging (MRI) using u-net deep learning
title_sort development of brain tumor segmentation of magnetic resonance imaging (mri) using u-net deep learning
publisher Technology Center
publishDate 2023
_version_ 1806425637427085312
score 13.214268