Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI

Segmentation of an acute ischemic stroke from a single modality of a greyscale magnetic resonance imaging (MRI) is an essential and challenging task. Recently, there are several numbers of related works on the automatic segmentation of infarct lesion from the input image and give a high accuracy...

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Main Authors: Abang Mohd Arif Anaqi, Abang Isa, Kuryati, Kipli, Ahmad Tirmizi, Jobli, Muhammad Hamdi, Mahmood, Siti Kudnie, Sahari, Aditya Tri, Hernowo, Sinin, Hamdan
Format: Article
Language:English
Published: Universiti Putra Malaysia Press 2021
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Online Access:http://ir.unimas.my/id/eprint/35471/1/Pseudo.pdf
http://ir.unimas.my/id/eprint/35471/
http://www.pertanika.upm.edu.my/resources/files/Pertanika%20PAPERS/JST%20Vol.%2029%20(2)%20Apr.%202021/03%20JST-2213-2020.pdf
https://doi.org/10.47836/pjst.29.2.03
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spelling my.unimas.ir.354712021-06-10T07:24:06Z http://ir.unimas.my/id/eprint/35471/ Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI Abang Mohd Arif Anaqi, Abang Isa Kuryati, Kipli Ahmad Tirmizi, Jobli Muhammad Hamdi, Mahmood Siti Kudnie, Sahari Aditya Tri, Hernowo Sinin, Hamdan T Technology (General) TA Engineering (General). Civil engineering (General) Segmentation of an acute ischemic stroke from a single modality of a greyscale magnetic resonance imaging (MRI) is an essential and challenging task. Recently, there are several numbers of related works on the automatic segmentation of infarct lesion from the input image and give a high accuracy in extraction of infarct lesion. Still, limited works have been reported in isolating the penumbra tissues and infarct core separately. The segmentation of the penumbra tissues is necessary because that region has the potential to recover. This paper presented an automated segmentation algorithm on diffusion-weighted magnetic resonance imaging (DW-MRI) image utilizing pseudo-colour conversion and K-means clustering techniques. A greyscale image contains only intensity information and often misdiagnosed due to overlap intensity of an image. Colourization is the method of adding colours to greyscale images which allocate luminance or intensity for red, green, and blue channels. The greyscale image is converted to pseudo-colour is to intensify the visual perception and deliver more information. Then, the algorithm segments the region of interest (ROI) using K-means clustering. The result shows the potential of automated segmentation to differentiate between the healthy and lesion tissues with 90.08% in accuracy and 0.89 in dice coefficient. The development of an automated segmentation algorithm was successfully achieved by entirely depending on the computer with minimal interaction. Universiti Putra Malaysia Press 2021-04-30 Article PeerReviewed text en http://ir.unimas.my/id/eprint/35471/1/Pseudo.pdf Abang Mohd Arif Anaqi, Abang Isa and Kuryati, Kipli and Ahmad Tirmizi, Jobli and Muhammad Hamdi, Mahmood and Siti Kudnie, Sahari and Aditya Tri, Hernowo and Sinin, Hamdan (2021) Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI. Pertanika Journal of Science & Technology,, 29 (2). pp. 1-16. ISSN 0128-7702 http://www.pertanika.upm.edu.my/resources/files/Pertanika%20PAPERS/JST%20Vol.%2029%20(2)%20Apr.%202021/03%20JST-2213-2020.pdf https://doi.org/10.47836/pjst.29.2.03
institution Universiti Malaysia Sarawak
building Centre for Academic Information Services (CAIS)
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Sarawak
content_source UNIMAS Institutional Repository
url_provider http://ir.unimas.my/
language English
topic T Technology (General)
TA Engineering (General). Civil engineering (General)
spellingShingle T Technology (General)
TA Engineering (General). Civil engineering (General)
Abang Mohd Arif Anaqi, Abang Isa
Kuryati, Kipli
Ahmad Tirmizi, Jobli
Muhammad Hamdi, Mahmood
Siti Kudnie, Sahari
Aditya Tri, Hernowo
Sinin, Hamdan
Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI
description Segmentation of an acute ischemic stroke from a single modality of a greyscale magnetic resonance imaging (MRI) is an essential and challenging task. Recently, there are several numbers of related works on the automatic segmentation of infarct lesion from the input image and give a high accuracy in extraction of infarct lesion. Still, limited works have been reported in isolating the penumbra tissues and infarct core separately. The segmentation of the penumbra tissues is necessary because that region has the potential to recover. This paper presented an automated segmentation algorithm on diffusion-weighted magnetic resonance imaging (DW-MRI) image utilizing pseudo-colour conversion and K-means clustering techniques. A greyscale image contains only intensity information and often misdiagnosed due to overlap intensity of an image. Colourization is the method of adding colours to greyscale images which allocate luminance or intensity for red, green, and blue channels. The greyscale image is converted to pseudo-colour is to intensify the visual perception and deliver more information. Then, the algorithm segments the region of interest (ROI) using K-means clustering. The result shows the potential of automated segmentation to differentiate between the healthy and lesion tissues with 90.08% in accuracy and 0.89 in dice coefficient. The development of an automated segmentation algorithm was successfully achieved by entirely depending on the computer with minimal interaction.
format Article
author Abang Mohd Arif Anaqi, Abang Isa
Kuryati, Kipli
Ahmad Tirmizi, Jobli
Muhammad Hamdi, Mahmood
Siti Kudnie, Sahari
Aditya Tri, Hernowo
Sinin, Hamdan
author_facet Abang Mohd Arif Anaqi, Abang Isa
Kuryati, Kipli
Ahmad Tirmizi, Jobli
Muhammad Hamdi, Mahmood
Siti Kudnie, Sahari
Aditya Tri, Hernowo
Sinin, Hamdan
author_sort Abang Mohd Arif Anaqi, Abang Isa
title Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI
title_short Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI
title_full Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI
title_fullStr Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI
title_full_unstemmed Pseudo-colour with K-means Clustering Algorithm for Acute Ischemic Stroke Lesion Segmentation in Brain MRI
title_sort pseudo-colour with k-means clustering algorithm for acute ischemic stroke lesion segmentation in brain mri
publisher Universiti Putra Malaysia Press
publishDate 2021
url http://ir.unimas.my/id/eprint/35471/1/Pseudo.pdf
http://ir.unimas.my/id/eprint/35471/
http://www.pertanika.upm.edu.my/resources/files/Pertanika%20PAPERS/JST%20Vol.%2029%20(2)%20Apr.%202021/03%20JST-2213-2020.pdf
https://doi.org/10.47836/pjst.29.2.03
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score 13.18916