An intelligent diagnostic system for malaria

Malaria is a serious health problem, causing many deaths and morbidity cases throughout the world particularly in Africa and south Asia. In 2013, there were about 198 million cases of malaria and an estimation of 584,000 deaths recorded globally, mostly among African children. Malaria is caused by...

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Main Author: Aimi Salihah, Abdul Nasir
Other Authors: Prof. Dr. Mohd Yusoff Mashor
Format: Thesis
Language:English
Published: Universiti Malaysia Perlis (UniMAP) 2019
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Online Access:http://dspace.unimap.edu.my:80/xmlui/handle/123456789/61534
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spelling my.unimap-615342019-08-22T06:48:58Z An intelligent diagnostic system for malaria Aimi Salihah, Abdul Nasir Prof. Dr. Mohd Yusoff Mashor Malaria Malaria diagnosis Malarsia parasite Intelligent diagnostic system Malaria is a serious health problem, causing many deaths and morbidity cases throughout the world particularly in Africa and south Asia. In 2013, there were about 198 million cases of malaria and an estimation of 584,000 deaths recorded globally, mostly among African children. Malaria is caused by infection of red blood cells with protozoan parasite of the genus Plasmodium. Plasmodium Falciparum and Plasmodium Vivax are the two main species that have caused the most malaria infections worldwide. Malaria can become lifethreatening if it is not treated immediately. Until now, microscopy-based diagnosis still remains the most widely used approaches for malaria diagnosis. However, this subjective evaluation procedure is time consuming, labour intensive and requires special training. Thus, this research has developed an intelligent diagnostic system for malaria which consists of image processing and intelligent classifier for the purpose of malaria diagnosis. A 3-stage classification of intelligent diagnostic system can be used as an early detection for malaria based on the classification of blood samples between normal and malaria on the first stage, and further classify the malaria sample as either P. falciparum or P. vivax species on the second stage, along with its four different life-cycle stages which are young trophozoite, mature trophozoite, schizont and gametocyte on the final stage. In order to perform the diagnosis process, the blood images were processed with various image processing techniques such as contrast enhancement and image segmentation for obtaining a fully segmented malaria parasite. As for contrast enhancement, this study proposed modified global and modified linear contrast stretching based on total pixel approach, as well as modified global and modified linear contrast stretching based on pixel level approach. After the image has been enhanced, the malaria image was segmented using different types of clustering algorithms. This included the used of the proposed enhanced kmeans clustering. The combination between contrast enhancement and image segmentation have provided good segmented malaria parasite. Later, various features such as size, shape and colour based features were extracted from the segmented malaria parasite. These features were fed as inputs to the three different classifiers which are multilayered perceptron (MLP) neural network trained by Levenberg-Marquardt (LM) algorithm, singlehidden layer feed forward neural network (SLFN) trained by online sequential extreme learning machine (OS-ELM) algorithm and random forest. The MLP network trained by LM algorithm has been proven to be the best with the highest classification performance as compared to others. Overall, the intelligent diagnostic system for malaria that has been developed using MLP network trained by LM algorithm is capable to perform the detection process by classifying a total of 1800 images consisting of malaria and normal blood images with testing accuracy, sensitivity and specificity of 95.28%, 96.06% and 86.00%, respectively. As for the diagnosis process, the system has classified a total of 1453 malaria images (accuracy of 90.81%) correctly into P. falciparum and P. vivax species, along with their four life-cycle stages. Thus, the proposed intelligent diagnostic system for malaria parasites is capable to perform the detection of malaria parasites, and then further diagnose the detected malaria parasites into its species and life-cycle stages. 2019-08-22T06:48:58Z 2019-08-22T06:48:58Z 2015 Thesis http://dspace.unimap.edu.my:80/xmlui/handle/123456789/61534 en Universiti Malaysia Perlis (UniMAP) School of Mechatronics Engineering
institution Universiti Malaysia Perlis
building UniMAP Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Perlis
content_source UniMAP Library Digital Repository
url_provider http://dspace.unimap.edu.my/
language English
topic Malaria
Malaria diagnosis
Malarsia parasite
Intelligent diagnostic system
spellingShingle Malaria
Malaria diagnosis
Malarsia parasite
Intelligent diagnostic system
Aimi Salihah, Abdul Nasir
An intelligent diagnostic system for malaria
description Malaria is a serious health problem, causing many deaths and morbidity cases throughout the world particularly in Africa and south Asia. In 2013, there were about 198 million cases of malaria and an estimation of 584,000 deaths recorded globally, mostly among African children. Malaria is caused by infection of red blood cells with protozoan parasite of the genus Plasmodium. Plasmodium Falciparum and Plasmodium Vivax are the two main species that have caused the most malaria infections worldwide. Malaria can become lifethreatening if it is not treated immediately. Until now, microscopy-based diagnosis still remains the most widely used approaches for malaria diagnosis. However, this subjective evaluation procedure is time consuming, labour intensive and requires special training. Thus, this research has developed an intelligent diagnostic system for malaria which consists of image processing and intelligent classifier for the purpose of malaria diagnosis. A 3-stage classification of intelligent diagnostic system can be used as an early detection for malaria based on the classification of blood samples between normal and malaria on the first stage, and further classify the malaria sample as either P. falciparum or P. vivax species on the second stage, along with its four different life-cycle stages which are young trophozoite, mature trophozoite, schizont and gametocyte on the final stage. In order to perform the diagnosis process, the blood images were processed with various image processing techniques such as contrast enhancement and image segmentation for obtaining a fully segmented malaria parasite. As for contrast enhancement, this study proposed modified global and modified linear contrast stretching based on total pixel approach, as well as modified global and modified linear contrast stretching based on pixel level approach. After the image has been enhanced, the malaria image was segmented using different types of clustering algorithms. This included the used of the proposed enhanced kmeans clustering. The combination between contrast enhancement and image segmentation have provided good segmented malaria parasite. Later, various features such as size, shape and colour based features were extracted from the segmented malaria parasite. These features were fed as inputs to the three different classifiers which are multilayered perceptron (MLP) neural network trained by Levenberg-Marquardt (LM) algorithm, singlehidden layer feed forward neural network (SLFN) trained by online sequential extreme learning machine (OS-ELM) algorithm and random forest. The MLP network trained by LM algorithm has been proven to be the best with the highest classification performance as compared to others. Overall, the intelligent diagnostic system for malaria that has been developed using MLP network trained by LM algorithm is capable to perform the detection process by classifying a total of 1800 images consisting of malaria and normal blood images with testing accuracy, sensitivity and specificity of 95.28%, 96.06% and 86.00%, respectively. As for the diagnosis process, the system has classified a total of 1453 malaria images (accuracy of 90.81%) correctly into P. falciparum and P. vivax species, along with their four life-cycle stages. Thus, the proposed intelligent diagnostic system for malaria parasites is capable to perform the detection of malaria parasites, and then further diagnose the detected malaria parasites into its species and life-cycle stages.
author2 Prof. Dr. Mohd Yusoff Mashor
author_facet Prof. Dr. Mohd Yusoff Mashor
Aimi Salihah, Abdul Nasir
format Thesis
author Aimi Salihah, Abdul Nasir
author_sort Aimi Salihah, Abdul Nasir
title An intelligent diagnostic system for malaria
title_short An intelligent diagnostic system for malaria
title_full An intelligent diagnostic system for malaria
title_fullStr An intelligent diagnostic system for malaria
title_full_unstemmed An intelligent diagnostic system for malaria
title_sort intelligent diagnostic system for malaria
publisher Universiti Malaysia Perlis (UniMAP)
publishDate 2019
url http://dspace.unimap.edu.my:80/xmlui/handle/123456789/61534
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score 13.222552