Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus

Polygonum minus (syn. Persicaria minor) is a herbal plant that is well known for producing sesquiterpenes, which contribute to its flavour and fragrance. This study describes the cloning and functional characterisation of PmSTPS1 and PmSTPS2, two sesquiterpene synthase genes that were identified fro...

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Main Authors: Nor Azizun Rusdi, Goh, Hoe-Han, Suriana Sabri, Ahmad Bazli Ramzi, Normah Mohd Noor, Syarul Nataqain Baharum
Format: Article
Language:English
Published: Molecular Diversity Preservation International 2018
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Online Access:https://eprints.ums.edu.my/id/eprint/42476/1/FULL%20TEXT.pdf
https://eprints.ums.edu.my/id/eprint/42476/
http://dx.doi.org/10.3390/molecules23061370
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spelling my.ums.eprints.424762024-12-31T01:23:10Z https://eprints.ums.edu.my/id/eprint/42476/ Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus Nor Azizun Rusdi Goh, Hoe-Han Suriana Sabri Ahmad Bazli Ramzi Normah Mohd Noor Syarul Nataqain Baharum QK1-474.5 General Including geographical distribution SB1-1110 Plant culture Polygonum minus (syn. Persicaria minor) is a herbal plant that is well known for producing sesquiterpenes, which contribute to its flavour and fragrance. This study describes the cloning and functional characterisation of PmSTPS1 and PmSTPS2, two sesquiterpene synthase genes that were identified from P. minus transcriptome data mining. The full-length sequences of the PmSTPS1 and PmSTPS2 genes were expressed in the E. coli pQE-2 expression vector. The sizes of PmSTPS1 and PmSTPS2 were 1098 bp and 1967 bp, respectively, with open reading frames (ORF) of 1047 and 1695 bp and encoding polypeptides of 348 and 564 amino acids, respectively. The proteins consist of three conserved motifs, namely, Asp-rich substrate binding (DDxxD), metal binding residues (NSE/DTE), and cytoplasmic ER retention (RxR), as well as the terpene synthase family N-terminal domain and C-terminal metal-binding domain. From the in vitro enzyme assays, using the farnesyl pyrophosphate (FPP) substrate, the PmSTPS1 enzyme produced multiple acyclic sesquiterpenes of β-farnesene, α-farnesene, and farnesol, while the PmSTPS2 enzyme produced an additional nerolidol as a final product. The results confirmed the roles of PmSTPS1 and PmSTPS2 in the biosynthesis pathway of P. minus, to produce aromatic sesquiterpenes. Molecular Diversity Preservation International 2018 Article NonPeerReviewed text en https://eprints.ums.edu.my/id/eprint/42476/1/FULL%20TEXT.pdf Nor Azizun Rusdi and Goh, Hoe-Han and Suriana Sabri and Ahmad Bazli Ramzi and Normah Mohd Noor and Syarul Nataqain Baharum (2018) Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus. Molecules, 23. pp. 1-15. http://dx.doi.org/10.3390/molecules23061370
institution Universiti Malaysia Sabah
building UMS Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Sabah
content_source UMS Institutional Repository
url_provider http://eprints.ums.edu.my/
language English
topic QK1-474.5 General Including geographical distribution
SB1-1110 Plant culture
spellingShingle QK1-474.5 General Including geographical distribution
SB1-1110 Plant culture
Nor Azizun Rusdi
Goh, Hoe-Han
Suriana Sabri
Ahmad Bazli Ramzi
Normah Mohd Noor
Syarul Nataqain Baharum
Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus
description Polygonum minus (syn. Persicaria minor) is a herbal plant that is well known for producing sesquiterpenes, which contribute to its flavour and fragrance. This study describes the cloning and functional characterisation of PmSTPS1 and PmSTPS2, two sesquiterpene synthase genes that were identified from P. minus transcriptome data mining. The full-length sequences of the PmSTPS1 and PmSTPS2 genes were expressed in the E. coli pQE-2 expression vector. The sizes of PmSTPS1 and PmSTPS2 were 1098 bp and 1967 bp, respectively, with open reading frames (ORF) of 1047 and 1695 bp and encoding polypeptides of 348 and 564 amino acids, respectively. The proteins consist of three conserved motifs, namely, Asp-rich substrate binding (DDxxD), metal binding residues (NSE/DTE), and cytoplasmic ER retention (RxR), as well as the terpene synthase family N-terminal domain and C-terminal metal-binding domain. From the in vitro enzyme assays, using the farnesyl pyrophosphate (FPP) substrate, the PmSTPS1 enzyme produced multiple acyclic sesquiterpenes of β-farnesene, α-farnesene, and farnesol, while the PmSTPS2 enzyme produced an additional nerolidol as a final product. The results confirmed the roles of PmSTPS1 and PmSTPS2 in the biosynthesis pathway of P. minus, to produce aromatic sesquiterpenes.
format Article
author Nor Azizun Rusdi
Goh, Hoe-Han
Suriana Sabri
Ahmad Bazli Ramzi
Normah Mohd Noor
Syarul Nataqain Baharum
author_facet Nor Azizun Rusdi
Goh, Hoe-Han
Suriana Sabri
Ahmad Bazli Ramzi
Normah Mohd Noor
Syarul Nataqain Baharum
author_sort Nor Azizun Rusdi
title Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus
title_short Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus
title_full Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus
title_fullStr Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus
title_full_unstemmed Functional characterisation of new sesquiterpene synthase from the Malaysian herbal plant, polygonum minus
title_sort functional characterisation of new sesquiterpene synthase from the malaysian herbal plant, polygonum minus
publisher Molecular Diversity Preservation International
publishDate 2018
url https://eprints.ums.edu.my/id/eprint/42476/1/FULL%20TEXT.pdf
https://eprints.ums.edu.my/id/eprint/42476/
http://dx.doi.org/10.3390/molecules23061370
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score 13.23648