Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication

Point-of-care diagnostic methods for animal species determination are critical for rapid, simple, and accurate enforcement of food labelling. PCR is the most common method for species identification. However, the requirement of using a thermal cycler created drawbacks for the PCR application, partic...

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Main Authors: Mohd Hazim Mohd Yusop, Mohd Fadzelly Abu Bakar, Kamarul Rahim Kamarudin 1,, Nur Fadhilah Khairil Mokhtar, Mohd Abd Motalib Hossain, Mohd Rafie Johan, Nor Qhairul Izzreen Mohd Noor
Format: Article
Language:English
English
Published: MDPI 2022
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Online Access:https://eprints.ums.edu.my/id/eprint/37405/1/ABSTRACT.pdf
https://eprints.ums.edu.my/id/eprint/37405/2/FULLTEXZT.pdf
https://eprints.ums.edu.my/id/eprint/37405/
https://doi.org/10.3390/molecules27238122
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spelling my.ums.eprints.374052023-09-26T02:14:43Z https://eprints.ums.edu.my/id/eprint/37405/ Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication Mohd Hazim Mohd Yusop Mohd Fadzelly Abu Bakar Kamarul Rahim Kamarudin 1, Nur Fadhilah Khairil Mokhtar Mohd Abd Motalib Hossain Mohd Rafie Johan Nor Qhairul Izzreen Mohd Noor TX341-641 Nutrition. Foods and food supply Point-of-care diagnostic methods for animal species determination are critical for rapid, simple, and accurate enforcement of food labelling. PCR is the most common method for species identification. However, the requirement of using a thermal cycler created drawbacks for the PCR application, particularly in low-resource settings. Hence, in this study, a method for porcine DNA detection using recombinase polymerase amplification (RPA), coupled with nucleic acid lateral flow immunoassay (NALFIA), was developed. Porcine-specific primers targeting pig (Sus scrofa) cytochrome b gene fragments specifically amplify a 197 bp fragment of the mitochondrial gene as being visualized by 2% agarose gel and PCRD NALFIA. The reaction temperature and time were 39 °C and 20 min, respectively. Herein, the specificity of the primers to porcine was confirmed after being assayed against six animal species, namely cow, goat, chicken, duck, dog, and rabbit. The porcine-specific RPA assay shows a high limit of detection of 0.01 ng/µL pork DNA. Based on the preliminary performance data obtained from this study, the potential of this method as a rapid and sensitive tool for porcine DNA detection in meat-based products is foreseen. MDPI 2022-11-22 Article NonPeerReviewed text en https://eprints.ums.edu.my/id/eprint/37405/1/ABSTRACT.pdf text en https://eprints.ums.edu.my/id/eprint/37405/2/FULLTEXZT.pdf Mohd Hazim Mohd Yusop and Mohd Fadzelly Abu Bakar and Kamarul Rahim Kamarudin 1, and Nur Fadhilah Khairil Mokhtar and Mohd Abd Motalib Hossain and Mohd Rafie Johan and Nor Qhairul Izzreen Mohd Noor (2022) Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication. Molecules, 27 (8122). pp. 1-9. https://doi.org/10.3390/molecules27238122
institution Universiti Malaysia Sabah
building UMS Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaysia Sabah
content_source UMS Institutional Repository
url_provider http://eprints.ums.edu.my/
language English
English
topic TX341-641 Nutrition. Foods and food supply
spellingShingle TX341-641 Nutrition. Foods and food supply
Mohd Hazim Mohd Yusop
Mohd Fadzelly Abu Bakar
Kamarul Rahim Kamarudin 1,
Nur Fadhilah Khairil Mokhtar
Mohd Abd Motalib Hossain
Mohd Rafie Johan
Nor Qhairul Izzreen Mohd Noor
Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
description Point-of-care diagnostic methods for animal species determination are critical for rapid, simple, and accurate enforcement of food labelling. PCR is the most common method for species identification. However, the requirement of using a thermal cycler created drawbacks for the PCR application, particularly in low-resource settings. Hence, in this study, a method for porcine DNA detection using recombinase polymerase amplification (RPA), coupled with nucleic acid lateral flow immunoassay (NALFIA), was developed. Porcine-specific primers targeting pig (Sus scrofa) cytochrome b gene fragments specifically amplify a 197 bp fragment of the mitochondrial gene as being visualized by 2% agarose gel and PCRD NALFIA. The reaction temperature and time were 39 °C and 20 min, respectively. Herein, the specificity of the primers to porcine was confirmed after being assayed against six animal species, namely cow, goat, chicken, duck, dog, and rabbit. The porcine-specific RPA assay shows a high limit of detection of 0.01 ng/µL pork DNA. Based on the preliminary performance data obtained from this study, the potential of this method as a rapid and sensitive tool for porcine DNA detection in meat-based products is foreseen.
format Article
author Mohd Hazim Mohd Yusop
Mohd Fadzelly Abu Bakar
Kamarul Rahim Kamarudin 1,
Nur Fadhilah Khairil Mokhtar
Mohd Abd Motalib Hossain
Mohd Rafie Johan
Nor Qhairul Izzreen Mohd Noor
author_facet Mohd Hazim Mohd Yusop
Mohd Fadzelly Abu Bakar
Kamarul Rahim Kamarudin 1,
Nur Fadhilah Khairil Mokhtar
Mohd Abd Motalib Hossain
Mohd Rafie Johan
Nor Qhairul Izzreen Mohd Noor
author_sort Mohd Hazim Mohd Yusop
title Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
title_short Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
title_full Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
title_fullStr Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
title_full_unstemmed Rapid detection of porcine DNA in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
title_sort rapid detection of porcine dna in meatball using recombinase polymerase amplification couple with lateral flow immunoassay for halal authentication
publisher MDPI
publishDate 2022
url https://eprints.ums.edu.my/id/eprint/37405/1/ABSTRACT.pdf
https://eprints.ums.edu.my/id/eprint/37405/2/FULLTEXZT.pdf
https://eprints.ums.edu.my/id/eprint/37405/
https://doi.org/10.3390/molecules27238122
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