Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy

Diabetic retinopathy (DR) is the leading cause of vision loss among older adults. The goal of this case-control study was to identify circulating miRNAs for the diagnosis of DR. The miRNeasy Serum/Plasma Kit was used to extract serum miRNAs. The mu Paraflo (TM) MicroRNA microarray was used to detect...

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Main Authors: Ji, Huihui, Yi, Quanyong, Chen, Lishuang, Wong, Liping, Liu, Yanfen, Xu, Guodong, Zhao, Jun, Huang, Tianyi, Li, Bin, Yang, Yong, Li, Wenxia, Han, Liyuan, Duan, Shiwei
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Published: Elsevier 2020
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Online Access:http://eprints.um.edu.my/36921/
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spelling my.um.eprints.369212024-11-07T00:52:02Z http://eprints.um.edu.my/36921/ Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy Ji, Huihui Yi, Quanyong Chen, Lishuang Wong, Liping Liu, Yanfen Xu, Guodong Zhao, Jun Huang, Tianyi Li, Bin Yang, Yong Li, Wenxia Han, Liyuan Duan, Shiwei R Medicine (General) RA Public aspects of medicine Diabetic retinopathy (DR) is the leading cause of vision loss among older adults. The goal of this case-control study was to identify circulating miRNAs for the diagnosis of DR. The miRNeasy Serum/Plasma Kit was used to extract serum miRNAs. The mu Paraflo (TM) MicroRNA microarray was used to detect the expression levels of the miRNAs. The miRWalk algorithm was applied to predict the target genes of the miRNAs, which were further confirmed by the dual luciferase reporter gene system in HEK293T cells. A microarray was performed between 5 DR cases and 5 age-, sex-, body mass index-, and duration of diabetes-matched type 2 diabetic (T2DM) controls. The quantitative reverse transcription polymerase chain reaction technique was used to validate the differentially expressed circulating miRNAs in 45 DR cases and 45 well-matched controls. Receiver operating characteristic (ROC) curve analysis was used to evaluate the performance of the circulating miRNAs as diagnostic biomarkers for DR. Our microarray analysis screened out miR-2116-5p and miR-3197 as significantly up regulated in DR cases compared with the controls. Furthermore, two miRNAs were validated in the 45 DR cases and 45 controls. The ROC analysis suggested that both miR-3197 and miR-2116-5p distinguished DR cases from controls. An additional dual-luciferase reporter gene assay confirmed that notch homolog 2 (NOTCH2) was the target gene of miR-2116-5p. Both miR-3197 and miR-2116-5p were identified as promising diagnostic biomarkers for DR. Future research is still needed to explore the molecular mechanisms of miR-3197 and miR-2116-5p in the pathogenesis of DR. Elsevier 2020-02 Article PeerReviewed Ji, Huihui and Yi, Quanyong and Chen, Lishuang and Wong, Liping and Liu, Yanfen and Xu, Guodong and Zhao, Jun and Huang, Tianyi and Li, Bin and Yang, Yong and Li, Wenxia and Han, Liyuan and Duan, Shiwei (2020) Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy. Clinica Chimica Acta, 501. pp. 147-153. ISSN 0009-8981, DOI https://doi.org/10.1016/j.cca.2019.10.036 <https://doi.org/10.1016/j.cca.2019.10.036>. 10.1016/j.cca.2019.10.036
institution Universiti Malaya
building UM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Malaya
content_source UM Research Repository
url_provider http://eprints.um.edu.my/
topic R Medicine (General)
RA Public aspects of medicine
spellingShingle R Medicine (General)
RA Public aspects of medicine
Ji, Huihui
Yi, Quanyong
Chen, Lishuang
Wong, Liping
Liu, Yanfen
Xu, Guodong
Zhao, Jun
Huang, Tianyi
Li, Bin
Yang, Yong
Li, Wenxia
Han, Liyuan
Duan, Shiwei
Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy
description Diabetic retinopathy (DR) is the leading cause of vision loss among older adults. The goal of this case-control study was to identify circulating miRNAs for the diagnosis of DR. The miRNeasy Serum/Plasma Kit was used to extract serum miRNAs. The mu Paraflo (TM) MicroRNA microarray was used to detect the expression levels of the miRNAs. The miRWalk algorithm was applied to predict the target genes of the miRNAs, which were further confirmed by the dual luciferase reporter gene system in HEK293T cells. A microarray was performed between 5 DR cases and 5 age-, sex-, body mass index-, and duration of diabetes-matched type 2 diabetic (T2DM) controls. The quantitative reverse transcription polymerase chain reaction technique was used to validate the differentially expressed circulating miRNAs in 45 DR cases and 45 well-matched controls. Receiver operating characteristic (ROC) curve analysis was used to evaluate the performance of the circulating miRNAs as diagnostic biomarkers for DR. Our microarray analysis screened out miR-2116-5p and miR-3197 as significantly up regulated in DR cases compared with the controls. Furthermore, two miRNAs were validated in the 45 DR cases and 45 controls. The ROC analysis suggested that both miR-3197 and miR-2116-5p distinguished DR cases from controls. An additional dual-luciferase reporter gene assay confirmed that notch homolog 2 (NOTCH2) was the target gene of miR-2116-5p. Both miR-3197 and miR-2116-5p were identified as promising diagnostic biomarkers for DR. Future research is still needed to explore the molecular mechanisms of miR-3197 and miR-2116-5p in the pathogenesis of DR.
format Article
author Ji, Huihui
Yi, Quanyong
Chen, Lishuang
Wong, Liping
Liu, Yanfen
Xu, Guodong
Zhao, Jun
Huang, Tianyi
Li, Bin
Yang, Yong
Li, Wenxia
Han, Liyuan
Duan, Shiwei
author_facet Ji, Huihui
Yi, Quanyong
Chen, Lishuang
Wong, Liping
Liu, Yanfen
Xu, Guodong
Zhao, Jun
Huang, Tianyi
Li, Bin
Yang, Yong
Li, Wenxia
Han, Liyuan
Duan, Shiwei
author_sort Ji, Huihui
title Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy
title_short Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy
title_full Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy
title_fullStr Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy
title_full_unstemmed Circulating miR-3197 and miR-2116-5p as novel biomarkers for diabetic retinopathy
title_sort circulating mir-3197 and mir-2116-5p as novel biomarkers for diabetic retinopathy
publisher Elsevier
publishDate 2020
url http://eprints.um.edu.my/36921/
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score 13.214268