Cultivable marine bacterial isolates from a sponge Hyattella cribriformis

Cultivable marine bacteria associated with the sponge Hyattella cribriformis (Hyatt, 1877) was studied through 16S rRNA gene sequencing. These marine bacterial colonies produced on Zobell Marine agar plates were distinguished based on phenotypic characters viz., colony morphology and pigmentations...

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Main Authors: C., Prasanna Kumar, John, Akbar, Khan, Ajmal, Lyla, Nair, Yunus, Kamaruzzaman, Khan Chowdhury, Ahmed Jalal
Format: Article
Language:English
Published: Asian Network for Scientific Information 2013
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Online Access:http://irep.iium.edu.my/29804/1/Paper_2.pdf
http://irep.iium.edu.my/29804/
http://scialert.net/abstract/?doi=jbs.2013.26.32
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spelling my.iium.irep.298042017-12-08T02:37:07Z http://irep.iium.edu.my/29804/ Cultivable marine bacterial isolates from a sponge Hyattella cribriformis C., Prasanna Kumar John, Akbar Khan, Ajmal Lyla, Nair Yunus, Kamaruzzaman Khan Chowdhury, Ahmed Jalal Q Science (General) Cultivable marine bacteria associated with the sponge Hyattella cribriformis (Hyatt, 1877) was studied through 16S rRNA gene sequencing. These marine bacterial colonies produced on Zobell Marine agar plates were distinguished based on phenotypic characters viz., colony morphology and pigmentations of the individual colonies. The extracted DNA from the individual bacterial isolates was PCR amplified using universal 16S primers and subjected to DNA sequencing. BLAST (Basic Local Alignment Tool) analysis finds that Vibrio diazotrophicus, Bacillus subtilis, B. firmus, Thalassomonas agarivorans, Oleiphilus messinensis, Planococcus maritimus and Brevundimonas vesicularis are the culturable marine bacteria associated with the sponge Hyattella cribriformis. The phylogram constructed clearly delineated the bacterial isolates into its corresponding phylum. The cultivable bacterial density of Hyattella cribriformis was found to be 65x10-5 CFU mL-1. Submitted sequences in NCBI were assigned with accession numbers (FJ834327, FJ834328, FJ834329, FJ845392, FJ845393, FJ845394 and FJ845395). It could be concluded that, application of 16S rRNA sequencing approach would yield novel insights into the diversity of bacteria associated with sponges and hence would help in exploring the commercial importance and their industrial applications. Asian Network for Scientific Information 2013 Article REM application/pdf en http://irep.iium.edu.my/29804/1/Paper_2.pdf C., Prasanna Kumar and John, Akbar and Khan, Ajmal and Lyla, Nair and Yunus, Kamaruzzaman and Khan Chowdhury, Ahmed Jalal (2013) Cultivable marine bacterial isolates from a sponge Hyattella cribriformis. Journal of Biological Sciences, 13 (1). pp. 26-32. ISSN 17273048 (P), 1812-5719 (O) http://scialert.net/abstract/?doi=jbs.2013.26.32 10.3923/jbs.2013.26.32
institution Universiti Islam Antarabangsa Malaysia
building IIUM Library
collection Institutional Repository
continent Asia
country Malaysia
content_provider International Islamic University Malaysia
content_source IIUM Repository (IREP)
url_provider http://irep.iium.edu.my/
language English
topic Q Science (General)
spellingShingle Q Science (General)
C., Prasanna Kumar
John, Akbar
Khan, Ajmal
Lyla, Nair
Yunus, Kamaruzzaman
Khan Chowdhury, Ahmed Jalal
Cultivable marine bacterial isolates from a sponge Hyattella cribriformis
description Cultivable marine bacteria associated with the sponge Hyattella cribriformis (Hyatt, 1877) was studied through 16S rRNA gene sequencing. These marine bacterial colonies produced on Zobell Marine agar plates were distinguished based on phenotypic characters viz., colony morphology and pigmentations of the individual colonies. The extracted DNA from the individual bacterial isolates was PCR amplified using universal 16S primers and subjected to DNA sequencing. BLAST (Basic Local Alignment Tool) analysis finds that Vibrio diazotrophicus, Bacillus subtilis, B. firmus, Thalassomonas agarivorans, Oleiphilus messinensis, Planococcus maritimus and Brevundimonas vesicularis are the culturable marine bacteria associated with the sponge Hyattella cribriformis. The phylogram constructed clearly delineated the bacterial isolates into its corresponding phylum. The cultivable bacterial density of Hyattella cribriformis was found to be 65x10-5 CFU mL-1. Submitted sequences in NCBI were assigned with accession numbers (FJ834327, FJ834328, FJ834329, FJ845392, FJ845393, FJ845394 and FJ845395). It could be concluded that, application of 16S rRNA sequencing approach would yield novel insights into the diversity of bacteria associated with sponges and hence would help in exploring the commercial importance and their industrial applications.
format Article
author C., Prasanna Kumar
John, Akbar
Khan, Ajmal
Lyla, Nair
Yunus, Kamaruzzaman
Khan Chowdhury, Ahmed Jalal
author_facet C., Prasanna Kumar
John, Akbar
Khan, Ajmal
Lyla, Nair
Yunus, Kamaruzzaman
Khan Chowdhury, Ahmed Jalal
author_sort C., Prasanna Kumar
title Cultivable marine bacterial isolates from a sponge Hyattella cribriformis
title_short Cultivable marine bacterial isolates from a sponge Hyattella cribriformis
title_full Cultivable marine bacterial isolates from a sponge Hyattella cribriformis
title_fullStr Cultivable marine bacterial isolates from a sponge Hyattella cribriformis
title_full_unstemmed Cultivable marine bacterial isolates from a sponge Hyattella cribriformis
title_sort cultivable marine bacterial isolates from a sponge hyattella cribriformis
publisher Asian Network for Scientific Information
publishDate 2013
url http://irep.iium.edu.my/29804/1/Paper_2.pdf
http://irep.iium.edu.my/29804/
http://scialert.net/abstract/?doi=jbs.2013.26.32
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score 13.214268