AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS

Malaria is one of the life threatening diseases caused by mosquitoes of Anopheles genus that carries the plasmodium parasite. In recent practice, popular methods of malaria disease identification are based on parasitological testing and diagnosis based on symptoms. Both methods have several drawback...

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Main Author: MOHD AZIZ, SITI SARAH AZREEN
Format: Final Year Project
Language:English
Published: Universiti Teknologi Petronas 2013
Subjects:
Online Access:http://utpedia.utp.edu.my/10041/1/Automated%20Quantification%20and%20Classification%20of%20Malaria%20Parasites%20in%20Thin%20Blood%20Smears.pdf
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spelling my-utp-utpedia.100412017-01-25T09:39:08Z http://utpedia.utp.edu.my/10041/ AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS MOHD AZIZ, SITI SARAH AZREEN TK Electrical engineering. Electronics Nuclear engineering Malaria is one of the life threatening diseases caused by mosquitoes of Anopheles genus that carries the plasmodium parasite. In recent practice, popular methods of malaria disease identification are based on parasitological testing and diagnosis based on symptoms. Both methods have several drawbacks such as limited access to microscopy experts especially in rural area practice, and restricted diagnostic facilities. In addition, accuracy rate is very much dependent in level of microbiologist’s expertise and experience level. Thus, there is an urge for a fast and highly accurate diagnosis technique. The main objective of this project is to improve the current diagnosis technique of malaria parasite in thin blood smears by means of automatic identification by using an image processing method. Focus will be on identifying and counting Plasmodium Vivax parasite at trophozoites stage in thin blood smears. Experiment is conducted in MATLAB environment specifically using the Image Processing Toolbox. Tasks will be divided into four main stages; image acquisition, image preprocessing, image segmentation and image classification. In preprocessing, images were converted to L*a*b* color spaces and are filtered to remove noises. For segmentation stage, a threshold for each image was calculated by using Otsu method. Further, dilation and erosion were performed to completely removed background elements. In the classification stage, images were classified based on the number of infected red blood cell detected. Testing has been done by using 350 images had yield in 99.72% sensitivity, 99.94% specificity and 98.90% positive predictive value. Result proved that this proposed method is able to automatically quantify and classify malaria parasites accurately. Universiti Teknologi Petronas 2013-05 Final Year Project NonPeerReviewed application/pdf en http://utpedia.utp.edu.my/10041/1/Automated%20Quantification%20and%20Classification%20of%20Malaria%20Parasites%20in%20Thin%20Blood%20Smears.pdf MOHD AZIZ, SITI SARAH AZREEN (2013) AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS. Universiti Teknologi Petronas. (Unpublished)
institution Universiti Teknologi Petronas
building UTP Resource Centre
collection Institutional Repository
continent Asia
country Malaysia
content_provider Universiti Teknologi Petronas
content_source UTP Electronic and Digitized Intellectual Asset
url_provider http://utpedia.utp.edu.my/
language English
topic TK Electrical engineering. Electronics Nuclear engineering
spellingShingle TK Electrical engineering. Electronics Nuclear engineering
MOHD AZIZ, SITI SARAH AZREEN
AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS
description Malaria is one of the life threatening diseases caused by mosquitoes of Anopheles genus that carries the plasmodium parasite. In recent practice, popular methods of malaria disease identification are based on parasitological testing and diagnosis based on symptoms. Both methods have several drawbacks such as limited access to microscopy experts especially in rural area practice, and restricted diagnostic facilities. In addition, accuracy rate is very much dependent in level of microbiologist’s expertise and experience level. Thus, there is an urge for a fast and highly accurate diagnosis technique. The main objective of this project is to improve the current diagnosis technique of malaria parasite in thin blood smears by means of automatic identification by using an image processing method. Focus will be on identifying and counting Plasmodium Vivax parasite at trophozoites stage in thin blood smears. Experiment is conducted in MATLAB environment specifically using the Image Processing Toolbox. Tasks will be divided into four main stages; image acquisition, image preprocessing, image segmentation and image classification. In preprocessing, images were converted to L*a*b* color spaces and are filtered to remove noises. For segmentation stage, a threshold for each image was calculated by using Otsu method. Further, dilation and erosion were performed to completely removed background elements. In the classification stage, images were classified based on the number of infected red blood cell detected. Testing has been done by using 350 images had yield in 99.72% sensitivity, 99.94% specificity and 98.90% positive predictive value. Result proved that this proposed method is able to automatically quantify and classify malaria parasites accurately.
format Final Year Project
author MOHD AZIZ, SITI SARAH AZREEN
author_facet MOHD AZIZ, SITI SARAH AZREEN
author_sort MOHD AZIZ, SITI SARAH AZREEN
title AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS
title_short AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS
title_full AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS
title_fullStr AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS
title_full_unstemmed AUTOMATED QUANTIFICATION AND CLASSIFICATION OF MALARIA PARASITES IN THIN BLOOD SMEARS
title_sort automated quantification and classification of malaria parasites in thin blood smears
publisher Universiti Teknologi Petronas
publishDate 2013
url http://utpedia.utp.edu.my/10041/1/Automated%20Quantification%20and%20Classification%20of%20Malaria%20Parasites%20in%20Thin%20Blood%20Smears.pdf
http://utpedia.utp.edu.my/10041/
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score 13.188404