Search Results - (( java implementation phase algorithm ) OR ( using a binding algorithm ))

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  1. 1
    Web-based clustering tool using fuzzy k-mean algorithm / Ahmad Zuladzlan Zulkifly

    Web-based clustering tool using fuzzy k-mean algorithm / Ahmad Zuladzlan Zulkifly by Zulkifly, Ahmad Zuladzlan

    Published 2019
    “…All the algorithm for the engine has been developed by using Java script language. …”
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  2. 2
    Optimal route checking using genetic algorithm for UiTM's bus services / Tengku Salman Fathi Tengku Jaafar

    Optimal route checking using genetic algorithm for UiTM's bus services / Tengku Salman Fathi Tengku Jaafar by Tengku Jaafar, Tengku Salman Fathi

    Published 2006
    “…Although from human logical thinking, the route can be generated easily but the calculation of checking the route whether it is optimal route or not is difficult and will take long time to be implemented. This research study with the development of the Optimal Route Checking Using Genetic Algorithm system should solve this scenario. …”
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  3. 3
    Soap performance enhancement for high volume messaging / Ali Baba Dauda

    Soap performance enhancement for high volume messaging / Ali Baba Dauda by Ali Baba , Dauda

    Published 2018
    “…To achieve this aim, LZ77 compression algorithm is modified to encode more symbols. The algorithm is then integrated into two Web services with HTTP and JMS bindings. …”
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  4. 4
    Computer aided design of efficient phytases

    Computer aided design of efficient phytases by Noorbatcha, Ibrahim Ali, Samsudin, Nurhusna, Hamzah, Mohd. Salleh, Syed Osman Idid, Syed Zahir Idid

    Published 2009
    “…It is found that mutation at position M216R and E219R leads to improvement in the binding strength while mutation at position H17A shows decrease in binding and mutation at A116T have no effect in the binding strength.…”
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  5. 5
    A bioinformatics approach to analyse a fatty acid and retinol binding protein secreted by ancylostoma caninum: an approach tow ards hookworms vaccine discovery / Normalisa Mohd Sapian

    A bioinformatics approach to analyse a fatty acid and retinol binding protein secreted by ancylostoma caninum: an approach tow ards hookworms vaccine discovery / Normalisa Mohd Sap... by Mohd Sapian, Normalisa

    Published 2009
    “…In this research, we are about to use the bioinformatics to analyze a fatty acid and retinol binding protein secreted by adult Ancylostoma caninum. …”
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  6. 6
    Molecular docking studies of Pyranose-2-oxidase from trametes multicolor

    Molecular docking studies of Pyranose-2-oxidase from trametes multicolor by Noorbatcha, Ibrahim Ali, Nuge, Tamrin, Yusof, Amirulakmal, Othman, Raihan, Mohd. Salleh, Hamzah

    Published 2013
    “…Then this active site is validated by automated docking of the substrates and comparing the docking score with the experimental results. Lamarckian genetic algorithm (LGA) is used to search for active sites and potential mean force (PMF) scoring method is used to evaluate different binding sites. …”
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  7. 7
    Computational design, synthesis and evaluation of caffeine imprinted molecular imprint polymer (MIP)

    Computational design, synthesis and evaluation of caffeine imprinted molecular imprint polymer (MIP) by Nurul Maisyarah, Samsudin

    Published 2011
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  8. 8
    Computer Aided Design of Polygalacturonase II from Aspergillus niger

    Computer Aided Design of Polygalacturonase II from Aspergillus niger by Noorbatcha, Ibrahim Ali, Ismail, Nur Izzah, Mohd. Salleh, Hamzah

    Published 2011
    “…The mutations R256Q, K258N and E252A show improvement of the binding score while N186E reduces the binding strength. …”
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  9. 9
    SOMEA: self-organizing map based extraction algorithm for DNA motif identification with heterogeneous model

    SOMEA: self-organizing map based extraction algorithm for DNA motif identification with heterogeneous model by Lee, Nung Kion, Wang, Dianhui

    Published 2011
    “…Results: This paper aims to develop a Self-Organizing Map (SOM) based clustering algorithm for extracting binding sites in DNA sequences. …”
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  10. 10
    Prediction of novel doping agent through the integration of chemical and biological data using in silico method

    Prediction of novel doping agent through the integration of chemical and biological data using in silico method by Mohd Rosman, Nurul Ain

    Published 2016
    “…In this study, an in silica method that integrates chemical and biological data was used to predict potential doping agents. The in silica method, also known as in silica target prediction, first analyse patterns of protein-ligand binding from chemical and biological data through the use of machine learning algorithm. …”
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  11. 11
    Enhanced chaotic image encryption algorithm based on Baker's map

    Enhanced chaotic image encryption algorithm based on Baker's map by Salleh, Mazleena, Ibrahim, Subariah, lsnin, Fauz

    Published 2003
    “…From the analysis done, it shows that the security level is high even though keys that are found to be weak keys for Baker’s map algorithm are being used in the algorithm. …”
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  12. 12
    Molecular docking of cellobiose and cellotetraose into an endoglucanase from fusarium oxysporum

    Molecular docking of cellobiose and cellotetraose into an endoglucanase from fusarium oxysporum by Ibrahim Ali, Noorbatcha, Hamzah, Mohd. Salleh

    Published 2014
    “…The docking of ligands into active site was carried out using Lamarkian Genetic Algorithm with a fast, simplified potential of mean force (PMF) to evaluate the docking efficiency. …”
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  13. 13
    AnkPlex: algorithmic structure for refinement of near-native ankyrin-protein docking

    AnkPlex: algorithmic structure for refinement of near-native ankyrin-protein docking by Wisitponchai, Tanchanok, Shoombuatong, Watshara, Lee, Vannajan Sanghiran, Kitidee, Kuntida, Tayapiwatana, Chatchai

    Published 2017
    “…The dataset was composed of 669 and 44,334 near-native and non-near-native poses, respectively, and it was used to generate eleven informative features. Subsequently, a re-scoring rank was generated by AnkPlex using a combination of a decision tree algorithm and logistic regression. …”
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  14. 14
    Modification and characterization of phytase for animal feed production

    Modification and characterization of phytase for animal feed production by Noorbatcha, Ibrahim Ali, Samsudin, Nurhusna, Mohd. Salleh, Hamzah

    Published 2009
    “…Automated docking based on genetic algorithm is used to dock the phytate in the active site and Partial Mean Force (PMF) scoring is used to calculate the strength of the binding before and after mutation.…”
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  15. 15
    Computer Aided Design of Polygalacturonase II from aspergillus niger

    Computer Aided Design of Polygalacturonase II from aspergillus niger by Noorbatcha, Ibrahim Ali, Ismail, Nur Izzah, Mohd. Salleh, Hamzah

    Published 2011
    “…In this project we have designed a novel polygalacturonase enzyme using computer aided design approaches. …”
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  16. 16
    Rational drug design using genetic algorithm: case of malaria disease

    Rational drug design using genetic algorithm: case of malaria disease by Al-Safi, Hassen Mohammed, Alshaikhli, Imad Fakhri Taha

    Published 2012
    “…Drug Diocopeltine A was found as the best lowest binding energy with the value of -8.64 Kcal/mol. …”
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  17. 17
    Computer Aided Design of potential inhibitors for Gaucher disease

    Computer Aided Design of potential inhibitors for Gaucher disease by Noorbatcha, Ibrahim Ali, Mohd. Salleh, Hamzah

    Published 2010
    “…Lamarckian genetic algorithm is used to locate the potential inhibitor sites in the acid β- glucosidase and strength of the binding is evaluated using potential mean force (PMF) scores. …”
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  18. 18
    Molecular docking of Cellobiose and Cellotetraose into an Endoglucanase from Fusarium oxysporum

    Molecular docking of Cellobiose and Cellotetraose into an Endoglucanase from Fusarium oxysporum by Ibrahim Ali , Noorbatcha, Ahmad, Abdul Aziz, Hamzah, Mohd. Salleh

    Published 2013
    “…The docking of ligands into active site was carried out using Lamarkian genetic algorithm with a fast, simplified potential of mean force (PMF) to evaluate the docking efficiency. …”
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  19. 19
    MotionSure: a cloud-based algorithm for detection of injected object in data in motion

    MotionSure: a cloud-based algorithm for detection of injected object in data in motion by Islam, Thouhedul, Olanrewaju, Rashidah Funke, Khalifa, Othman Omran

    Published 2017
    “…Total 1600 different type of files were used for evaluation of the proposed algorithm, results show that 87% of injected objects were correctly detected…”
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  20. 20
    Elucidating the mechanism of action of Centella asiatica ethanolic extract and triterpenoids as a potential anti-leukaemic agent through the integration of in silico and in vitro studies / Norodiyah Othman

    Elucidating the mechanism of action of Centella asiatica ethanolic extract and triterpenoids as a potential anti-leukaemic agent through the integration of in silico and in vitro s... by Othman, Norodiyah

    Published 2022
    “…The triterpenoids were predicted to bind to SLC29A1, TNFa, and NR3C1 with different scores. …”
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