Search Results - (( java application using algorithmic ) OR ( sequence optimization techniques algorithm ))

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  1. 1

    Design and development of optimal path trace back using graph theory technique for accelerate DNA sequence alignment accelerator: article by Othman, Nor Shuhaida

    Published 2010
    “…This paper presents the improvement of Smith-Waterman algorithm in comparing between two DNA sequence alignments. …”
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    Article
  2. 2
  3. 3

    Design of DNA sequence alignment accelerated system using 2-dimensional array and custom instruction on FPGA / Nur Dalilah Ahmad Sabri by Ahmad Sabri, Nur Dalilah

    Published 2018
    “…Thus, this research concentrates on the optimization techniques based on Custom Instruction (CI) and Rectangular Dimensional array (2D) that proposed on Smith-Waterman (SW) algorithm. …”
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    Thesis
  4. 4

    Design and development of optimal path trace back using graph theory technique for accelerate DNA sequence alignment accelerator by Othman, Nor Shuhaida

    Published 2010
    “…This paper presents the improvement of Smith-Waterman algorithm in comparing between two DNA sequence alignments. …”
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    Student Project
  5. 5

    Gravitational Search Algorithm for Assembly Sequence Planning by Ismail, Ibrahim, Zuwairie, Ibrahim, Hamzah, Ahmad, Mohd Falfazli, Mat Jusof, Zulkifli, Md. Yusof, Sophan Wahyudi, Nawawi, Marizan, Mubin

    Published 2014
    “…In past few years, many optimization techniques have been used to solve the assembly sequence planning problem include Simulated Annealing (SA), Genetic Algorithm (GA), and binary Particle Swarm Optimization (BPSO). …”
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    Conference or Workshop Item
  6. 6

    Product assembly and disassembly sequence optimization based on genetic algorithm and design for assembly methodologies by Yasin, Azman, Puteh, Nurnasran, Daud, Ruslizam

    Published 2009
    “…In this paper, an Artificial Intelligence (AI) technique, namely Genetic Algorithm (GA) is proposed to optimize product components assembly and disassembly sequences.The proposed methodology is developed and tested on an industrial product made of plastics with no integrated assembly and permanent joint parts.GA method is applied to determine the accuracy and optimum results based on 20 assembly and disassembly sequence solutions that was generated by the Design for Assembly methodology.The results indicated that GA based approach is able to obtain a near optimal solution for assembly and disassembly sequences.…”
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  7. 7

    Product assembly sequence optimization based on genetic algorithm by Yasin, Azman, Puteh, Nurnasran, Daud, Ruslizam, Omar, Mazni, Syed-Abdullah, Sharifah Lailee

    Published 2010
    “…Genetic algorithm (GA) is a search technique used in computing to find approximate solution to optimization and search problem based on the theory of natural selection. …”
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    Article
  8. 8

    Potential of data minimization techniques approach in improving DNA sequences alignment and comparison / Syed Abdul Mutalib Al Junid … [et al.] by Al Junid, Syed Abdul Mutalib, Haron, Muhammad Adib, Abd Majid, Zulkifli, Othman, Zulkifli

    Published 2012
    “…Specifically, the research objectives are i) to study various DNA sequences alignment algorithms characteristics, architectures and techniques such as scoring functions, optimal alignment and gap; and ii) to investigate the potential of data minimization approach in minimizing the size of data towards discovering the region of similarity in DNA sequences alignment and comparison and iii) to analyze the optimal sequences alignment properties for molecular biology and bioinformatics application. …”
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    Research Reports
  9. 9

    Optimized tree-classification algorithm for classification of protein sequences by Iqbal, M.J., Faye, I., Said, A.M., Belhaouari Samir, B.

    Published 2016
    “…In this work, we have proposed an optimized tree-classification technique which uses cluster k nearest neighbor classification algorithm to classify protein sequences into superfamilies. …”
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  10. 10

    Optimized tree-classification algorithm for classification of protein sequences by Iqbal, M.J., Faye, I., Said, A.M., Belhaouari Samir, B.

    Published 2016
    “…In this work, we have proposed an optimized tree-classification technique which uses cluster k nearest neighbor classification algorithm to classify protein sequences into superfamilies. …”
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    Conference or Workshop Item
  11. 11

    Fuzzy Mixed Assembly Line Sequencing and Scheduling Optimization Model Using Multiobjective Dynamic Fuzzy GA by Zahari, Taha, Farzad, Tahriri, Siti Zawiah, Md Dawal

    Published 2014
    “…An improved genetic algorithm called fuzzy adaptive genetic algorithm (FAGA) is proposed in order to solve this optimization model. …”
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    Article
  12. 12

    Computational Technique for an Efficient Classification of Protein Sequences With Distance-Based Sequence Encoding Algorithm by Iqbal, M.J., Faye, I., Said, A.M.D., Samir, B.B.

    Published 2017
    “…In this article, we have proposed a distance-based sequence encoding algorithm that captures the sequence's statistical characteristics along with amino acids sequence order information. …”
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    Article
  13. 13

    Optimizing optimal path trace back system for Smith-Waterman algorithm using structural modelling technique: article by Saliman, Nur Farah Ain

    Published 2012
    “…back system for Smith-Waterman Algorithm using Structural Modelling Technique. The objectives for this paper are to optimize the best trace back scanning performance and also to design the simple architecture in order to reduce the runtime. …”
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    Article
  14. 14

    Multilevel optimization for dense motion estimation by Saaban, Azizan, Kalmoun, El Mostafa, Ibrahim, Haslinda, Ramli, Razamin, Omar, Zurni

    Published 2011
    “…We evaluated the performance of different optimization techniques developed in the context of optical flow computation with different variational models.In particular, based on truncated Newton methods (TN) that have been an effective approach for large-scale unconstrained optimization, we developed the use of efficient multilevel schemes for computing the optical flow.More precisely, we evaluated the performance of a standard unidirectional multilevel algorithm - called multiresolution optimization (MR/Opt), to a bidrectional multilevel algorithm - called full multigrid optimization (FMG/Opt).The FMG/Opt algorithm treats the coarse grid correction as an optimization search direction and eventually scales it using a line search. …”
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    Monograph
  15. 15

    An optimized test case generation technique for enhancing state-sensitivity partitioning by Sultan, Ammar Mohammed Dawood

    Published 2017
    “…The essence of enSSP is to combine the features of Genetic Algorithm (GA) with a suite reduction technique to achieve optimization. …”
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    Thesis
  16. 16

    BASE: a bacteria foraging algorithm for cell formation with sequence data by Nouri, Hossein, Tang, Sai Hong, Baharudin, B. T. Hang Tuah, Mohd Ariffin, Mohd Khairol Anuar

    Published 2010
    “…In addition, a newly developed BFA-based optimization algorithm for CF based on operation sequences is discussed. …”
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    Article
  17. 17

    Adopting genetic algorithm to enhance state-sensitivity partitioning by Sultan, Ammar Mohammed, Baharom, Salmi, Abd Ghani, Abdul Azim, Din, Jamilah, Zulzalil, Hazura

    Published 2015
    “…Genetic algorithm (GA) has been identified as the most common potential technique among several optimization techniques. …”
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  18. 18

    Adopting genetic algorithm to enhance state-sensitivity partitioning by Mohammed Sultan, Ammar, Baharom, Salmi, Abd Ghani, Abdul Azim, Din, Jamilah, Zulzalil, Hazura

    Published 2015
    “…Genetic algorithm (GA) has been identified as the most common potential technique among several optimization techniques.Thus, GA is investigated for the integrating with the existing SSP. …”
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  19. 19

    Block based motion vector estimation using fuhs16 uhds16 and uhds8 algorithms for video sequence by S. S. S. , Ranjit

    Published 2011
    “…Block-matching algorithm is the most common technique applied in block-based motion estimation technique. …”
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    Book Chapter
  20. 20

    An improved binary particle swarm optimization algorithm for DNA encoding enhancement by Mohd Saufee, Muhammad, Krishna Veni, Selvan, Sharifah Masniah, Wan Masra

    Published 2011
    “…The results obtained show that this algorithm executes better sequences and did perform better compared to other optimization techniques. …”
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    Article