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  1. 1
    Missing-values imputation algorithms for microarray gene expression data

    Missing-values imputation algorithms for microarray gene expression data by Moorthy, Kohbalan, Jaber, Aws Naser, Mohd Arfian, Ismail, Ernawan, Ferda, Mohd Saberi, Mohamad, Safaai, Deris

    Published 2019
    “…In gene expression studies, missing values are a common problem with important consequences for the interpretation of the final data (Satija et al., Nat Biotechnol 33(5):495, 2015). …”
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  2. 2
    Gene subset selection for lung cancer classification using a multi-objective strategy

    Gene subset selection for lung cancer classification using a multi-objective strategy by Mohamad, Mohd. Saberi, Omatu, Sigeru, Deris, Safaai, Yoshioka, Michifuci

    Published 2008
    “…However, the urgent problems in the use of gene expression data are the availability of a huge number of genes relative to the small number of available samples, and many of the genes are not relevant to the classification. …”
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  3. 3
    A model for gene selection and classification of gene expression data

    A model for gene selection and classification of gene expression data by Mohamad, Mohd Saberi, Omatu, Sigeru, Deris, Safaai, Mohd Hashim, Siti Zaiton

    Published 2007
    “…One problem arising from these data is how to select a small subset of genes from thousands of genes and a few samples that are inherently noisy. …”
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  4. 4
    Effective gene selection techniques for classification of gene expression data

    Effective gene selection techniques for classification of gene expression data by Yeo, Lee Chin

    Published 2005
    “…Various k-means clustering algorithms and model-based clustering algorithms are proposed to group the genes. …”
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  5. 5
    Attribute reduction based scheduling algorithm with enhanced hybrid genetic algorithm and particle swarm optimization for optimal device selection

    Attribute reduction based scheduling algorithm with enhanced hybrid genetic algorithm and particle swarm optimization for optimal device selection by Nwogbaga, Nweso Emmanuel, Latip, Rohaya, Affendey, Lilly Suriani, Abdul Rahiman, Amir Rizaan

    Published 2022
    “…The simulation is implemented with iFogSim and java programming language. …”
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  6. 6
    An Evaluation of Machine Learning Algorithms for Missing Values Imputation

    An Evaluation of Machine Learning Algorithms for Missing Values Imputation by Kohbalan, Moorthy, Ali, Mohammed Hasan, Mohd Arfian, Ismail, Chan, Weng Howe, Mohd Saberi, Mohamad, Safaai, Deris

    Published 2019
    “…In gene expression studies missing values have been a common problem. …”
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  7. 7
    Enhancement of Ant Colony Optimization for Grid Job Scheduling and Load Balancing

    Enhancement of Ant Colony Optimization for Grid Job Scheduling and Load Balancing by Husna, Jamal Abdul Nasir

    Published 2011
    “…Global pheromone update is performed after the completion of processing the jobs in order to reduce the pheromone value of resources. A simulation environment was developed using Java programming to test the performance of the proposed EACO algorithm against existing grid resource management algorithms such as Antz algorithm, Particle Swarm Optimization algorithm, Space Shared algorithm and Time Shared algorithm, in terms of processing time and resource utilization. …”
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  8. 8
    A combinatory algorithm of univariate and multivariate gene selection

    A combinatory algorithm of univariate and multivariate gene selection by Mahmoodian, Sayed Hamid, Marhaban, Mohammad Hamiruce, Abdul Rahim, Raha, Rosli, Rozita, Saripan, M. Iqbal

    Published 2009
    “…Microarray technology has provided the means to monitor the expression levels of a large number of genes simultaneously. …”
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  9. 9
    Ant colony optimization algorithm for load balancing in grid computing

    Ant colony optimization algorithm for load balancing in grid computing by Ku-Mahamud, Ku Ruhana, Mohamed Din, Aniza

    Published 2012
    “…The proposed algorithm is known as the enhance ant colony optimization (EACO). …”
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  10. 10
    Integrated framework with association analysis for gene selection in microarray data classification

    Integrated framework with association analysis for gene selection in microarray data classification by Ong, Huey Fang

    Published 2011
    “…However, most of the existing gene selection methods are statistical analyses and purely based on gene expression values in the identification of differentially expressed genes. …”
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  11. 11
    Investigation of the Effects of Imputation Methods for Gene Regulatory Networks Modelling Using Dynamic Bayesian Networks

    Investigation of the Effects of Imputation Methods for Gene Regulatory Networks Modelling Using Dynamic Bayesian Networks by Sin, Yi Lim, Mohd Saberi, Mohamad, Lian, En Chai, Safaai, Deris, Weng, Howe Chan, Sigeru, Omatu, Muhammad Farhan, Sjaugi, Muhammad Mahfuz, Zainuddin, Gopinathaan, Rajamohan, Zuwairie, Ibrahim, Zulkifli, Md. Yusof

    Published 2016
    “…DNA microarray technology plays an important role in advancing the analysis of gene expression and gene functions. However, gene expression data often contain missing values, which cause problems as most of the analysis methods of gene expression data require a complete matrix. …”
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  12. 12
    Early Diagnosis of Non-small-cell lung Carcinoma from Gene Expression Using t-Distributed Stochastic Neighbor Embedding

    Early Diagnosis of Non-small-cell lung Carcinoma from Gene Expression Using t-Distributed Stochastic Neighbor Embedding by Zarzar, Mouayad, Razak, Eliza, Htike@Muhammad Yusof, Zaw Zaw, Yusof, Faridah

    Published 2015
    “…For this reason, we attempted to come up with a machine-learning-based strategy called composite hypercubes on iterated random projections (CHIRP) in order to settle the problem of detection of early NSCLC from DNA biochip gene expression data. …”
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  13. 13
    Development and validation of promoter prediction system for recombinant lipase expression in Pichia pastoris

    Development and validation of promoter prediction system for recombinant lipase expression in Pichia pastoris by Gogo, Mayaki Fatima

    Published 2017
    “…LipExPS was able to address the problem of promoter/host choice in lipase expression when using P. pastoris as a host by predicting the promoters that can be used to express the gene submitted to LipExPS. …”
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  14. 14
    Filter-Wrapper Methods For Gene Selection In Cancer Classification

    Filter-Wrapper Methods For Gene Selection In Cancer Classification by Alomari, Osama Ahmad Suleiman

    Published 2018
    “…The wrapper approach encounters problems of complex interactions among genes and stagnation in local optima. …”
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  15. 15
    DNA microarray gene expression analysis for diagnosis of oral dysplasia and squamous-cell carcinoma

    DNA microarray gene expression analysis for diagnosis of oral dysplasia and squamous-cell carcinoma by Zarzar, Mouayad, Razak, Eliza, Htike@Muhammad Yusof, Zaw Zaw, Yusof, Faridah

    Published 2015
    “…Specifically, DNA chip gene expression technology is currently helping researchers to distinguish oral dysplasia and squamous-cell carcinoma thru analysis of gene expression in tissue samples. …”
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  16. 16
    OPTIMIZED MIN-MIN TASK SCHEDULING ALGORITHM FOR SCIENTIFIC WORKFLOWS IN A CLOUD ENVIRONMENT

    OPTIMIZED MIN-MIN TASK SCHEDULING ALGORITHM FOR SCIENTIFIC WORKFLOWS IN A CLOUD ENVIRONMENT by Murad S.S., Badeel R., Alsandi N.S.A., Alshaaya R.F., Ahmed R.A., Muhammed A., Derahman M.

    Published 2023
    “…To achieve this, we propose a new noble mechanism called Optimized Min-Min (OMin-Min) algorithm, inspired by the Min-Min algorithm. …”
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  17. 17
    Embedded system for indoor guidance parking with Dijkstra’s algorithm and ant colony optimization

    Embedded system for indoor guidance parking with Dijkstra’s algorithm and ant colony optimization by Mohammad Ata, Karimeh Ibrahim

    Published 2019
    “…This study proposes a car parking management system which applies Dijkstra’s algorithm, Ant Colony Optimization (ACO) and Binary Search Tree (BST) in structuring a guidance system for indoor parking. …”
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  18. 18
    Features selection for intrusion detection system using hybridize PSO-SVM

    Features selection for intrusion detection system using hybridize PSO-SVM by Tabaan, Alaa Abdulrahman

    Published 2016
    “…Hybridize Particle Swarm Optimization (PSO) as a searching algorithm and support vector machine (SVM) as a classifier had been implemented to cope with this problem. …”
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  19. 19
    The importance of data classification using machine learning methods in microarray data

    The importance of data classification using machine learning methods in microarray data by Jaber, Aws Naser, Moorthy, Kohbalan, Machap, Logenthiran, Safaai, Deris

    Published 2021
    “…One of them is microarrays, which is a type of representation for gene expression that is helpful in diagnosis. To unleash the full potential of microarrays, machine-learning algorithms and gene selection methods can be implemented to facilitate processing on microarrays and to overcome other potential challenges. …”
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  20. 20
    Resource management in grid computing using ant colony optimization

    Resource management in grid computing using ant colony optimization by Ku-Mahamud, Ku Ruhana, Mohamed Din, Aniza

    Published 2011
    “…Resources with high pheromone value are selected to process the submitted jobs.Global pheromone update is performed after completion processing the jobs in order to reduce the pheromone value of resources.A simulation environment was developed using Java programming to test the performance of the proposed EACO algorithm against other ant based algorithm, in terms of resource utilization.Experimental results show that EACO produced better grid resource management solution.…”
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