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  1. 1
    Linear-pso with binary search algorithm for DNA motif discovery / Hazaruddin Harun

    Linear-pso with binary search algorithm for DNA motif discovery / Hazaruddin Harun by Harun, Hazaruddin

    Published 2015
    “…The Linear-PSO algorithm was the first version of improvement. However due to the longer time required for complete execution of this algorithm, the Binary Search technique was integrated and a new version of the algorithm was developed, namely the Linear-PSO with Binary Search (LPBS) algorithm. …”
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  2. 2
    Analyzing DNA Sequences Using Clustering Algorithm

    Analyzing DNA Sequences Using Clustering Algorithm by Alhersh, Taha Talib Ragheb

    Published 2009
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  3. 3
    Development of DNA-based dynamic key-dependent block cipher

    Development of DNA-based dynamic key-dependent block cipher by Saeed, Auday H.

    Published 2015
    “…Hence, it is necessary to research and develop a secure symmetric cipher algorithm. Since the declaration of Rijndael as AES this cipher has been the target of many attacks, and the attempts to break it are ongoing and even increasing everyday by taking advantage of the rapid development in computing capabilities. …”
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  4. 4
    Generic DNA encoding design scheme to solve combinatorial problems

    Generic DNA encoding design scheme to solve combinatorial problems by Rofilde, Hasudungan

    Published 2015
    “…Currently, data encoding in DNA computing is tightly coupled with an algorithm that solves an instance of the problem. …”
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  5. 5
    ECG encryption enhancement with multi-layers of AES and DNA computing

    ECG encryption enhancement with multi-layers of AES and DNA computing by Kh-Madhloom, Jamal

    Published 2023
    “…In order to more effectively incorporate both present technology and developing technology, models of DNA cryptography need to be developed. …”
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  6. 6
    Design of DNA sequence alignment accelerated system using 2-dimensional array and custom instruction on FPGA / Nur Dalilah Ahmad Sabri

    Design of DNA sequence alignment accelerated system using 2-dimensional array and custom instruction on FPGA / Nur Dalilah Ahmad Sabri by Ahmad Sabri, Nur Dalilah

    Published 2018
    “…The proposed 2D Array on SW algorithm has been developed and designed by using ideas over previous work of CI on SW algorithm. …”
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  7. 7
    Development of gene motif modulation for information processing in artificial DNA computing

    Development of gene motif modulation for information processing in artificial DNA computing by Shamsudin, Ahmad Faizul, Suhaimi, Mohd Adam, Ibrahim Ali , Noorbatcha, Hussin, Ummu Salamah, A. F., Alya Khadijah, D., Nor Hidayah

    Published 2014
    “…In the artificial DNA computing model, the MAS (Multi-Agent System) algorithm depicts the sender agent transmits moleware information through the control agent which is then converted to binary data as input to the receiver agent. …”
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  8. 8
    Design of DNA fragment assembly using IWP method on application-specific integrated-circuit / Hasniliati Hassan

    Design of DNA fragment assembly using IWP method on application-specific integrated-circuit / Hasniliati Hassan by Hassan, Hasniliati

    Published 2017
    “…The key innovation is to implement DNA sequence assembly algorithms on ASIC to make it a synthesisable IP block. …”
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  9. 9
    Design and analysis of high performance and low power matrix filling for DNA sequence allignment accelerator using ASIC design flow / Nurul Farhana Abd Razak

    Design and analysis of high performance and low power matrix filling for DNA sequence allignment accelerator using ASIC design flow / Nurul Farhana Abd Razak by Abd Razak, Nurul Farhana

    Published 2010
    “…The objective of this paper is to improve the performance of the DNA sequence alignment and to optimize power reduction of the existing technique by using Smith Waterman (SW) algorithm. …”
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  10. 10
    Design and development of high performance swa cell design for local DNA sequence alignment

    Design and development of high performance swa cell design for local DNA sequence alignment by Syed Abdul Rahman, Syed Abdul Mutalib Al Junid

    Published 2017
    “…The performance of the DNA sequence alignment system strongly depends on the algorithm, design architecture and accelerator performance. …”
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  11. 11
    Computational methods for self-assembly of DNA nanostructures / Ong Hui San

    Computational methods for self-assembly of DNA nanostructures / Ong Hui San by Ong, Hui San

    Published 2016
    “…Several approaches have been adopted including development of an autonomous tool that incorporated evolutionary optimization algorithm in constructing these heterogeneous DNA shapes and the application of heuristic through undirected graph theory as an annotation schema to produce the connectivity maps. …”
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  12. 12
    Computational Discovery of Motifs Using Hierarchical Clustering Techniques

    Computational Discovery of Motifs Using Hierarchical Clustering Techniques by Wang, Dianhui, Lee, Nung Kion

    Published 2008
    “…This paper aims to develop data mining techniques for discovering motifs. …”
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  13. 13
    Design and analysis multiple paths trace back and reconstruction module for DNA sequence alignment accelerator using ASIC design flow: article / Nurul Ain Husaini

    Design and analysis multiple paths trace back and reconstruction module for DNA sequence alignment accelerator using ASIC design flow: article / Nurul Ain Husaini by Husaini, Nurul Ain

    Published 2010
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  14. 14
    DNA Motif Prediction using Novel Ensemble Approach

    DNA Motif Prediction using Novel Ensemble Approach by Choong, Allen Chieng Hoon

    Published 2020
    “…The primary contribution of this thesis work is the development of an ensemble method called ENSPART with the novelty of using data partitioning technique on ChIP dataset for DNA motif prediction. …”
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  15. 15
    Identifying living organisms by using artificial neural networks approach / Raifiza Abdul Rahim

    Identifying living organisms by using artificial neural networks approach / Raifiza Abdul Rahim by Abdul Rahim, Raifiza

    Published 2003
    “…A multi-layer backpropagation algorithm of one hidden layer with 5 neurons was used. …”
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  16. 16
    Ensemble Framework for Motif Discovery Based on Data Partitioning

    Ensemble Framework for Motif Discovery Based on Data Partitioning by Choong, Allen Chieng Hoon

    Published 2020
    “…The primary contribution of this thesis work is the development of an ensemble method called ENSPART with the novelty of using data partitioning technique on ChIP dataset for DNA motif prediction. …”
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  17. 17
    Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems

    Parallel implementation of genomic sequences classification using modified Gabor wavelet transform on multicore systems by Gunawan, Teddy Surya, Ambikairajah, Eliathamby

    Published 2012
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  18. 18
    Parallel implementation of genomic sequences classification using modified gabor wavelet transform on multicore systems

    Parallel implementation of genomic sequences classification using modified gabor wavelet transform on multicore systems by Gunawan, Teddy Surya, Ambikairajah, Eliathamby

    Published 2012
    “…This paper presents the parallel implementation of the gene and exon identification of DNA sequences using the previously developed modified Gabor wavelet transform on multicore systems. …”
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  19. 19
    Plasmodium knowlesi Genome Sequences from Clinical Isolates Reveal Extensive Genomic Dimorphism

    Plasmodium knowlesi Genome Sequences from Clinical Isolates Reveal Extensive Genomic Dimorphism by Miguel M., Pinheiro, Md Atique, Ahmed, Scott B., Millar, Theo, Sanderson, Thomas, D. Otto, Woon, Chan Lu, Sanjeev, Krishna, Julian C., Rayner, Janet, Cox-Singh

    Published 2015
    “…An in-house algorithm was developed to detect SNP sites co-associating with the dimorphism. …”
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  20. 20
    Optimized tree-classification algorithm for classification of protein sequences

    Optimized tree-classification algorithm for classification of protein sequences by Iqbal, M.J., Faye, I., Said, A.M., Belhaouari Samir, B.

    Published 2016
    “…The data gathered is mainly comprised of DNA, RNA and protein sequences, which are imprecise, incomplete and increasing exponentially. …”
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